Pairwise Alignments

Query, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  426 bits (1095), Expect = e-123
 Identities = 234/533 (43%), Positives = 343/533 (64%), Gaps = 14/533 (2%)

Query: 6   LLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNAR 65
           +L+VR L V+  ++     A+  +   I  G TL IVGESGSGKSV    +M LL K   
Sbjct: 10  ILEVRGLRVALPSDADRPHAIAQLDLRIEAGRTLCIVGESGSGKSVLATTVMGLLSKGLV 69

Query: 66  IHPESSIMFEGEELLNK----TDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIR 121
           +     ++  GE+L++     +D ++R++RG  +GM+FQEPMT+LNP +  G QV E +R
Sbjct: 70  LEG-GDVILSGEKLVDNGRFTSDKRLRQLRGTGMGMVFQEPMTALNPVLTCGEQVDELLR 128

Query: 122 CHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIA 181
            H      + K  +L +F+ V LPDP   +  +PH+ SGGQ QRI+IAMA+I +P +LI 
Sbjct: 129 THTAWGAAERKAHILSIFERVRLPDPARIHASYPHQLSGGQRQRIVIAMAIILKPRLLIC 188

Query: 182 DEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGS 241
           DEPTTALDVT QAE+L+LI E+QA  G A+LFITHD+GVV  +AD V+VM +G +VEQG 
Sbjct: 189 DEPTTALDVTTQAEILKLIAELQAEQGSAVLFITHDMGVVAEIADDVMVMHRGALVEQGP 248

Query: 242 TEQLFLQPEHDYTRMLINSIPKGSKDPVAVD---AAPLLKAEDIRVKFLVKPYFISRRNQ 298
            +Q+   P   YTRML++++P G   P A +     PLL  + +   +  + +    R +
Sbjct: 249 CDQVLRSPREAYTRMLLDAVP-GMTPPPARELPGGRPLLAGQGVGKIYTRRDWL--GRAK 305

Query: 299 YFEAVKGISLELKQGETLGIVGESGSGKSTLGRALIGLL-PSTGQIAFKGQDFRALSEKQ 357
           +  A++  S+ + +GET+G+VGESGSGKST  R +I L+ PS G I +   + R L E +
Sbjct: 306 HNTALQDASVAVHRGETVGVVGESGSGKSTFARCMIRLISPSAGSILWGDAEVRDLPEGR 365

Query: 358 RLALKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDP 417
              L+  +Q+VFQDP  SL+PR TVG  + EG +     +SKL   Q A   ++ ++L  
Sbjct: 366 LRPLRSRVQVVFQDPNRSLNPRRTVGSSMVEGAM--NFGLSKLHARQTAEELMDRIQLPR 423

Query: 418 NSINRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRN 477
            +++RYPH+FSGGQRQR+AIARA+  +P  ++ DE  SALD SVQ  +++LL+EIQ+   
Sbjct: 424 TALDRYPHQFSGGQRQRLAIARAIACQPQVLVADEAVSALDVSVQAQILDLLREIQRDLG 483

Query: 478 IGYLFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAAS 530
           +G LFI+HDL V   L DRV+VM +G+++EQG    +F  P ++YT++L+AA+
Sbjct: 484 LGILFITHDLRVAAQLCDRVIVMSQGRIVEQGPTGQVFAAPANDYTRRLLAAA 536



 Score =  182 bits (461), Expect = 4e-50
 Identities = 104/264 (39%), Positives = 164/264 (62%), Gaps = 14/264 (5%)

Query: 5   PLLQVRNLSVSFTTNDGVV-----DAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQL 59
           PLL  + +   +T  D +       A+++ S  +  GET+ +VGESGSGKS     +++L
Sbjct: 284 PLLAGQGVGKIYTRRDWLGRAKHNTALQDASVAVHRGETVGVVGESGSGKSTFARCMIRL 343

Query: 60  LPKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEA 119
           +  +A      SI++   E+ +  + ++R +R  R+ ++FQ+P  SLNP   VG  + E 
Sbjct: 344 ISPSA-----GSILWGDAEVRDLPEGRLRPLRS-RVQVVFQDPNRSLNPRRTVGSSMVEG 397

Query: 120 IRCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDIL 179
              +  +S+  A+Q   EL   + LP  + A  ++PH+FSGGQ QR+ IA A+  +P +L
Sbjct: 398 AM-NFGLSKLHARQTAEELMDRIQLP--RTALDRYPHQFSGGQRQRLAIARAIACQPQVL 454

Query: 180 IADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQ 239
           +ADE  +ALDV+VQA++L L++EIQ ++G+ ILFITHDL V   + DRV+VM +G +VEQ
Sbjct: 455 VADEAVSALDVSVQAQILDLLREIQRDLGLGILFITHDLRVAAQLCDRVIVMSQGRIVEQ 514

Query: 240 GSTEQLFLQPEHDYTRMLINSIPK 263
           G T Q+F  P +DYTR L+ + P+
Sbjct: 515 GPTGQVFAAPANDYTRRLLAAAPR 538