Pairwise Alignments

Query, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  439 bits (1130), Expect = e-127
 Identities = 249/541 (46%), Positives = 354/541 (65%), Gaps = 23/541 (4%)

Query: 5   PLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNA 64
           PL+ V+ L V+F    G  + V  + F I  GE LA+VGESGSGK+V+  +L++L+ +NA
Sbjct: 11  PLIDVKGLRVAF----GGKEVVHGIDFQIAAGEKLALVGESGSGKTVTALSLLRLV-QNA 65

Query: 65  RIHPESSI-----MFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEA 119
            +  E+ +          +LL+  + ++R IRG  I MIFQEPMT+LN    VG Q+AE 
Sbjct: 66  DVTGEARLYGAERQQAPRDLLSIPERELRGIRGKEIAMIFQEPMTALNALYSVGDQIAEV 125

Query: 120 IRCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDIL 179
           +  H  +S   A+   ++L     +P+P    + FPH+ SGGQ QR MIAMAL  +P +L
Sbjct: 126 LELHEALSARAAQAAAVQLLADTGIPEPARRARAFPHQLSGGQRQRAMIAMALACKPRLL 185

Query: 180 IADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQ 239
           +ADEPTTALDVTV+A++L L+ ++Q   GMA+L ITHDL +V+  ADRV+VM  G VVE 
Sbjct: 186 LADEPTTALDVTVRAQILDLLADLQHKYGMAVLLITHDLNLVRRFADRVVVMENGHVVEH 245

Query: 240 GSTEQLFLQPEHDYTRMLINSIPKGSKDPVAVDAA----PLLKAEDIRVKFLVKPYFISR 295
           G+   +F  P+H YTR LI+S P  ++D  AV A+    P+L+A+ +RV + V    I  
Sbjct: 246 GAVAPVFDAPQHPYTRKLIDSHP--TRDVAAVQASPAAVPVLEAKALRVIYPVPKPGIGG 303

Query: 296 --RNQYFEAVKGISLELKQGETLGIVGESGSGKSTLGRALIGLLPSTGQIAFKGQDFRAL 353
             R   F AV+G    +  GETLG+VGESGSGKSTL  A +GLL   G +   G+D+ A+
Sbjct: 304 WFRKGEFVAVQGADFRIVPGETLGVVGESGSGKSTLALAALGLLKHQGALKIAGKDW-AV 362

Query: 354 SEKQRLALKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEV 413
                L L++ +Q+VFQDP+ SLSPRMTV +I+ EGL VH P +    R  R+  AL +V
Sbjct: 363 DRASDLGLRRVMQVVFQDPFSSLSPRMTVEQIVGEGLRVHAPELGVEARRARSLAALADV 422

Query: 414 RLD----PNSINRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELL 469
            L     P+ ++RYPHEFSGGQRQR+AIARALI++P  ++LDEPTSALD ++Q  V+ LL
Sbjct: 423 GLTESQFPSLLDRYPHEFSGGQRQRLAIARALIVDPQLLVLDEPTSALDVTIQKQVLGLL 482

Query: 470 KEIQKRRNIGYLFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAA 529
           + +Q+ R + YL I+HD+ V++A++ +V+VM+ G ++E G  E +   P+H YTKKL+AA
Sbjct: 483 QRLQRERGLSYLLITHDVEVIRAMAHQVIVMKDGAILETGPVERVLGAPEHPYTKKLVAA 542

Query: 530 S 530
           +
Sbjct: 543 A 543