Pairwise Alignments

Query, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., Oligopeptide transport ATP-binding protein @ Glutathione ABC transporter, ATP-binding protein GsiA from Variovorax sp. SCN45

 Score =  478 bits (1229), Expect = e-139
 Identities = 267/561 (47%), Positives = 362/561 (64%), Gaps = 39/561 (6%)

Query: 6   LLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNAR 65
           +L V +L+V F+T++  VDAVK +SF +  GETLA+VGESGSGKSV++ ALM+L+     
Sbjct: 13  VLAVDDLTVRFSTSERTVDAVKKLSFHVDHGETLAVVGESGSGKSVTSLALMRLVEHGGG 72

Query: 66  IHPESSIMFE---GE--ELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAI 120
                S+ F    GE  +L    D+ MR IRG  I MIFQEPMTSLNP    G Q+AEAI
Sbjct: 73  RILGGSMAFRRRNGEVLDLAQARDSTMRGIRGADIAMIFQEPMTSLNPVFTAGDQIAEAI 132

Query: 121 RCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILI 180
           R H+  S + A+   L + +LV +P+ +    +FPH+ SGG  QR+MIAMAL  +P +LI
Sbjct: 133 RIHQGKSDSAARAEALRMLELVRIPEARNVLDRFPHQLSGGMRQRVMIAMALSCKPQLLI 192

Query: 181 ADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQG 240
           ADEPTTALDVT+QA++L+LI+E+Q  M M +LFITHD+GVV  +ADRVLVM +GD VE G
Sbjct: 193 ADEPTTALDVTIQAQILQLIRELQKEMRMGVLFITHDMGVVAEIADRVLVMYRGDKVEAG 252

Query: 241 STEQLFLQPEHDYTRMLINSIPK------------------------------GSKDPVA 270
           S++ +F  P+H YTR L++++PK                                +D V 
Sbjct: 253 SSDTVFAAPQHPYTRALLSAVPKLGAMQGTDLPAKFDLLRTESPADAAPPEPATPQDTVR 312

Query: 271 VDAAPLLKAEDIRVKFLVKPYFISRRNQYFEAVKGISLELKQGETLGIVGESGSGKSTLG 330
            DA P+L+  D+  +F V+     R  +   AV+ IS +L  GETL +VGESG GKST G
Sbjct: 313 EDAGPILRVRDLVTRFDVRSGLFGRVKRRVHAVEKISFDLYPGETLALVGESGCGKSTTG 372

Query: 331 RALIGLLPS-TGQIAFKGQDFRALSEKQRLALKKDIQMVFQDPYGSLSPRMTVGEIITEG 389
           R+L+ L+ S +G I F GQ+ R L  ++  AL+++IQ +FQDP+ SL PR+TVG  I E 
Sbjct: 373 RSLLRLVESQSGAIEFGGQNIRELPTRELQALRRNIQFIFQDPFASLDPRVTVGFSIMEP 432

Query: 390 LLVHQPHISK-LERMQRARRALEEVRLDPNSINRYPHEFSGGQRQRIAIARALILEPSFI 448
           LL+H   I+K  E  QR    L++V L P    RYPHEFSGGQRQRIAIARAL L P  +
Sbjct: 433 LLIH--GIAKGAEAQQRVDWLLQKVGLPPEVAQRYPHEFSGGQRQRIAIARALALNPKVV 490

Query: 449 LLDEPTSALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVMQKGQVMEQ 508
           + DE  SALD S+Q  ++ L+ ++Q+   + +LFISHD+AVV+ +S RV VM  GQ++E 
Sbjct: 491 VADESVSALDVSIQAQIVNLMLDLQRELGVAFLFISHDMAVVERISHRVAVMYLGQIVEI 550

Query: 509 GSAESIFHNPQHEYTKKLIAA 529
           G   ++F  PQH YT+KL+AA
Sbjct: 551 GPRRAVFEAPQHAYTRKLMAA 571



 Score =  191 bits (485), Expect = 7e-53
 Identities = 109/265 (41%), Positives = 166/265 (62%), Gaps = 15/265 (5%)

Query: 5   PLLQVRNLSVSFTTNDGV-------VDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALM 57
           P+L+VR+L   F    G+       V AV+ +SFD+ PGETLA+VGESG GKS +  +L+
Sbjct: 317 PILRVRDLVTRFDVRSGLFGRVKRRVHAVEKISFDLYPGETLALVGESGCGKSTTGRSLL 376

Query: 58  QLLPKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVA 117
           +L+   +      +I F G+ +      +++ +R + I  IFQ+P  SL+P + VG  + 
Sbjct: 377 RLVESQS-----GAIEFGGQNIRELPTRELQALRRN-IQFIFQDPFASLDPRVTVGFSIM 430

Query: 118 EAIRCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPD 177
           E +  H      +A+QRV  L Q V LP P+ A Q++PHEFSGGQ QRI IA AL   P 
Sbjct: 431 EPLLIHGIAKGAEAQQRVDWLLQKVGLP-PEVA-QRYPHEFSGGQRQRIAIARALALNPK 488

Query: 178 ILIADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVV 237
           +++ADE  +ALDV++QA+++ L+ ++Q  +G+A LFI+HD+ VV+ ++ RV VM  G +V
Sbjct: 489 VVVADESVSALDVSIQAQIVNLMLDLQRELGVAFLFISHDMAVVERISHRVAVMYLGQIV 548

Query: 238 EQGSTEQLFLQPEHDYTRMLINSIP 262
           E G    +F  P+H YTR L+ ++P
Sbjct: 549 EIGPRRAVFEAPQHAYTRKLMAAVP 573