Pairwise Alignments

Query, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  449 bits (1154), Expect = e-130
 Identities = 242/555 (43%), Positives = 347/555 (62%), Gaps = 33/555 (5%)

Query: 6   LLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNAR 65
           LL+V+NL + + +  GV  AVK+++ DI+ GE + +VGESG+GKS   NA++ LL     
Sbjct: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62

Query: 66  IHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHRN 125
           I     +   GE++   +   MR +RG +IG IFQ+PMTSLNP   V  Q+ E I  +  
Sbjct: 63  I-AGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQ 121

Query: 126 VSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEPT 185
           VS  +A QR L L + V +P P+   +++PH+FSGG  QR++IA+AL  EPD++IADEPT
Sbjct: 122 VSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPT 181

Query: 186 TALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQL 245
           TALDV++Q ++L LI+E+     +  + +THD+GVV  V DRV VM +GD+VE G T ++
Sbjct: 182 TALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKV 241

Query: 246 FLQPEHDYTRMLINSIPKGSK-----------------DPVAVDA-------------AP 275
              PEH YTR LI+++P+  +                  P+ V +              P
Sbjct: 242 LGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKYTGP 301

Query: 276 LLKAEDIRVKFLVKPYFISRRNQYFEAVKGISLELKQGETLGIVGESGSGKSTLGRALIG 335
           LLK E++ ++F+ K      R +Y +A   +S  + +GET G+VGESGSGKST+ R + G
Sbjct: 302 LLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAG 361

Query: 336 LL-PSTGQIAFKGQDFRAL-SEKQRLALKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVH 393
           L  P+ G++ F+G D  AL SE +R  L++ +QMVFQ+PY S++PRM + +II E +  H
Sbjct: 362 LYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFH 421

Query: 394 QPHISKLERMQRARRALEEVRLDPNSINRYPHEFSGGQRQRIAIARALILEPSFILLDEP 453
           +   S+ E  Q     LE V L   +  +YPHEFSGGQRQRI+IARAL   P  ++ DEP
Sbjct: 422 KLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDEP 481

Query: 454 TSALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVMQKGQVMEQGSAES 513
           TSALD SVQ  ++ LLK++Q   N+  LFISHDL V++ + DRV VMQ G ++E    E 
Sbjct: 482 TSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQ 541

Query: 514 IFHNPQHEYTKKLIA 528
           +F +PQHEY+KKLI+
Sbjct: 542 LFTDPQHEYSKKLIS 556



 Score =  199 bits (507), Expect = 2e-55
 Identities = 115/267 (43%), Positives = 164/267 (61%), Gaps = 15/267 (5%)

Query: 5   PLLQVRNLSVSFTTNDGV-------VDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALM 57
           PLL+V N+++ F T D +       V A  NVSF +  GET  +VGESGSGKS     + 
Sbjct: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360

Query: 58  QLLPKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVA 117
            L   NA       + FEG +L        RR    ++ M+FQ P TS+NP M++   +A
Sbjct: 361 GLYQPNA-----GRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIA 415

Query: 118 EAIRCHRNV-SQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEP 176
           E IR H+   S+++ +Q V +L + V L    G   K+PHEFSGGQ QRI IA AL   P
Sbjct: 416 EPIRFHKLTRSESETRQIVNDLLEHVGLGKMAGL--KYPHEFSGGQRQRISIARALATRP 473

Query: 177 DILIADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDV 236
            +LI DEPT+ALDV+VQA++L L+K++Q  + + +LFI+HDL V++ + DRV VM  G +
Sbjct: 474 RLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTL 533

Query: 237 VEQGSTEQLFLQPEHDYTRMLINSIPK 263
           +E   TEQLF  P+H+Y++ LI+ +P+
Sbjct: 534 LEVAPTEQLFTDPQHEYSKKLISLMPE 560



 Score =  179 bits (455), Expect = 2e-49
 Identities = 101/262 (38%), Positives = 159/262 (60%), Gaps = 16/262 (6%)

Query: 276 LLKAEDIRVKFLVKPYFISRRNQYFEAVKGISLELKQGETLGIVGESGSGKSTLGRALIG 335
           LL+ +++R+++         R+    AVK ++L++++GE +G+VGESG+GKST+G A+I 
Sbjct: 3   LLEVKNLRIEY-------PSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVID 55

Query: 336 LLPSTGQIA-----FKGQDFRALS-EKQRLALKKDIQMVFQDPYGSLSPRMTVGEIITEG 389
           LL   G IA       G+    LS +  R      I  +FQDP  SL+P  TV   +TE 
Sbjct: 56  LLSPPGTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTET 115

Query: 390 LLVHQPHISKLERMQRARRALEEVRLDP--NSINRYPHEFSGGQRQRIAIARALILEPSF 447
           +  +   +S  E  QRA   +++V +    N + +YPH+FSGG RQR+ IA AL  EP  
Sbjct: 116 IHANM-QVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDL 174

Query: 448 ILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVMQKGQVME 507
           I+ DEPT+ALD S+Q  ++ L++E+ K+ N+G + ++HD+ VV  ++DRV VM +G ++E
Sbjct: 175 IIADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVE 234

Query: 508 QGSAESIFHNPQHEYTKKLIAA 529
            G    +   P+H YT+ LI+A
Sbjct: 235 FGPTAKVLGTPEHPYTRSLISA 256