Pairwise Alignments

Query, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  565 bits (1455), Expect = e-165
 Identities = 291/533 (54%), Positives = 396/533 (74%), Gaps = 6/533 (1%)

Query: 1   MSPNPLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLL 60
           MS   L++VR+L+V F T D V   V  VSFDIR GETLA+VGESGSGKSV+ +++++LL
Sbjct: 1   MSEQNLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLL 60

Query: 61  PKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAI 120
           P     HP  SI +EG++LL +++  ++RIRG+RI MIFQEPMTSLNP   +  Q+ E +
Sbjct: 61  PYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEIL 120

Query: 121 RCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILI 180
             H+ ++  +A  R LEL  +V +P+P+   +  PHE SGGQ QR+MIAMAL NEP++LI
Sbjct: 121 LLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLI 180

Query: 181 ADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQG 240
           ADEPTTALDVTVQ ++L L+KE+QA MGMA+L I+HDL +V+ +A RV VM +G +VEQ 
Sbjct: 181 ADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQA 240

Query: 241 STEQLFLQPEHDYTRMLINSIPKG--SKDPVAVDAAPLLKAEDIRVKFLVKPYFISRRNQ 298
               LF  P+H YT+MLIN+ P G  + +PV    APLL+ +D++V F +K  F+ R   
Sbjct: 241 ECATLFSSPQHHYTQMLINAEPSGLPAHNPV---GAPLLEVDDLKVWFPIKKGFLQRTVD 297

Query: 299 YFEAVKGISLELKQGETLGIVGESGSGKSTLGRALIGLLPSTGQIAFKGQDFRALSEKQR 358
           + +AV G++  L QG+TLGIVGESGSGKSTLG A++ L+ S G I F GQ+   L++K  
Sbjct: 298 HVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLISSQGGIRFHGQNLEGLNQKAV 357

Query: 359 LALKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPN 418
             L++++Q+VFQDP+GSLSPRM V +I+ EGL +H+   ++ E+      ALEEV LDP 
Sbjct: 358 RPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIGTAQ-EQEAAIIAALEEVGLDPR 416

Query: 419 SINRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNI 478
           + +RYPHEFSGGQRQRIAIARAL+L+P+ ILLDEPTSALDR+VQ  V+ELL+ +Q++ N+
Sbjct: 417 TRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNL 476

Query: 479 GYLFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAASF 531
            YLFISHDLAVVKALS +++V++ G V+EQG A++IFH PQH YT++L+ A+F
Sbjct: 477 TYLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEAAF 529