Pairwise Alignments
Query, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 539 a.a., ABC transporter, ATP-binding protein from Pseudomonas putida KT2440
Score = 407 bits (1045), Expect = e-118
Identities = 232/531 (43%), Positives = 341/531 (64%), Gaps = 7/531 (1%)
Query: 1 MSPNPLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLL 60
MS +PL++VR+LSVS++ A++ +SF + GETLA+VGESGSGKS NAL+ LL
Sbjct: 1 MSQSPLIEVRDLSVSYSFAGQRSQALRQLSFSLVQGETLAVVGESGSGKSTLANALLGLL 60
Query: 61 PKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAI 120
P NARI + + +G ++ ++ R++RG IG++ Q+PM SLNP R+G Q+AEA+
Sbjct: 61 PGNARID-QGQLWVDGVDMAQASERARRQLRGRTIGLVPQDPMVSLNPTQRIGQQIAEAL 119
Query: 121 RCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILI 180
+ R + +VL L V L +P +++PHE SGG QR++IA+AL EP ++I
Sbjct: 120 QLARGRRYPGQEAKVLALLDQVGLDEPALRARQYPHELSGGMRQRVLIAIALAGEPRLII 179
Query: 181 ADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQG 240
ADEPT+ALDVTVQ +L ++ + A G+++L ITHDLG+ ADR+LVM +G+ VE G
Sbjct: 180 ADEPTSALDVTVQRRILDHLQLLVAERGISLLIITHDLGMACDRADRLLVMKQGEQVEHG 239
Query: 241 STEQLFLQPEHDYTRMLINSIPKGSKDPVAVDAAPLLKAEDIRVKFLVKPYFISRRNQYF 300
S Q+ YTR L+++ P + P AAP + +R+ + K + + +N+++
Sbjct: 240 SPRQILWGARQPYTRALLDAAP--AFVPRRRPAAPRGQTPLLRLSHVGKRFELPGKNEHY 297
Query: 301 EAVKGISLELKQGETLGIVGESGSGKSTLGRALIGL-LPSTGQIAFKGQDFRALSEKQRL 359
A+ +SLEL G+TL IVGESGSGKST R +GL PS GQ+ F G+D + Q
Sbjct: 298 TALHDLSLELHAGQTLAIVGESGSGKSTALRIALGLEKPSQGQVVFAGEDVTGYTWSQFR 357
Query: 360 ALKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQR-ARRALEEVRLDPN 418
L++ IQ+V Q+P+ +L PR TV + + E L+ + + E ++R AR + V+L
Sbjct: 358 PLRRRIQLVQQNPFAALDPRFTVFDSVVEPLVSF--GLLRGEALERKARELITRVQLPVQ 415
Query: 419 SINRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNI 478
++R P E SGGQRQR+AIARAL LEP +LLDEP SALD SVQ ++ LL E+Q+ +
Sbjct: 416 FLDRLPRELSGGQRQRVAIARALALEPEVLLLDEPVSALDVSVQAQILALLDELQRELGM 475
Query: 479 GYLFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAA 529
Y+ +SHDLAVV +++D+VLV+++GQV+EQG A + YT+ LI A
Sbjct: 476 AYVLVSHDLAVVASMADQVLVLRRGQVVEQGPALQVLSKSASAYTRALIDA 526
Score = 164 bits (415), Expect = 8e-45
Identities = 105/265 (39%), Positives = 154/265 (58%), Gaps = 16/265 (6%)
Query: 274 APLLKAEDIRVKFLVKPYFISRRNQYFEAVKGISLELKQGETLGIVGESGSGKSTLGRAL 333
+PL++ D+ V + F +R+Q A++ +S L QGETL +VGESGSGKSTL AL
Sbjct: 4 SPLIEVRDLSVSYS----FAGQRSQ---ALRQLSFSLVQGETLAVVGESGSGKSTLANAL 56
Query: 334 IGLLPST-----GQIAFKGQDFRALSEKQRLALK-KDIQMVFQDPYGSLSPRMTVGEIIT 387
+GLLP GQ+ G D SE+ R L+ + I +V QDP SL+P +G+ I
Sbjct: 57 LGLLPGNARIDQGQLWVDGVDMAQASERARRQLRGRTIGLVPQDPMVSLNPTQRIGQQIA 116
Query: 388 EGLLVHQPHISKLERMQRARRALEEVRLDPNSIN--RYPHEFSGGQRQRIAIARALILEP 445
E L + + + + L++V LD ++ +YPHE SGG RQR+ IA AL EP
Sbjct: 117 EALQLARGRRYPGQEA-KVLALLDQVGLDEPALRARQYPHELSGGMRQRVLIAIALAGEP 175
Query: 446 SFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVMQKGQV 505
I+ DEPTSALD +VQ +++ L+ + R I L I+HDL + +DR+LVM++G+
Sbjct: 176 RLIIADEPTSALDVTVQRRILDHLQLLVAERGISLLIITHDLGMACDRADRLLVMKQGEQ 235
Query: 506 MEQGSAESIFHNPQHEYTKKLIAAS 530
+E GS I + YT+ L+ A+
Sbjct: 236 VEHGSPRQILWGARQPYTRALLDAA 260
Score = 162 bits (409), Expect = 4e-44
Identities = 98/249 (39%), Positives = 148/249 (59%), Gaps = 10/249 (4%)
Query: 25 AVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNARIHPESSIMFEGEELLNKTD 84
A+ ++S ++ G+TLAIVGESGSGKS + + L + + ++F GE++ T
Sbjct: 299 ALHDLSLELHAGQTLAIVGESGSGKSTALRIALGLEKPS-----QGQVVFAGEDVTGYTW 353
Query: 85 TQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHRNVSQNQAKQRVLELFQLVHL 144
+Q R +R RI ++ Q P +L+P V V E + + +++ EL V L
Sbjct: 354 SQFRPLRR-RIQLVQQNPFAALDPRFTVFDSVVEPLVSFGLLRGEALERKARELITRVQL 412
Query: 145 PDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEPTTALDVTVQAEVLRLIKEIQ 204
P + P E SGGQ QR+ IA AL EP++L+ DEP +ALDV+VQA++L L+ E+Q
Sbjct: 413 PVQ--FLDRLPRELSGGQRQRVAIARALALEPEVLLLDEPVSALDVSVQAQILALLDELQ 470
Query: 205 ANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQLFLQPEHDYTRMLINSIPKG 264
+GMA + ++HDL VV +AD+VLV+ +G VVEQG Q+ + YTR LI++IP
Sbjct: 471 RELGMAYVLVSHDLAVVASMADQVLVLRRGQVVEQGPALQVLSKSASAYTRALIDAIPGH 530
Query: 265 SKD--PVAV 271
S+ PVA+
Sbjct: 531 SRSMLPVAI 539