Pairwise Alignments

Query, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 565 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

 Score =  451 bits (1160), Expect = e-131
 Identities = 245/557 (43%), Positives = 351/557 (63%), Gaps = 48/557 (8%)

Query: 5   PLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNA 64
           PLL++++L V+F  +     AV+ +   + PGETLA+VGESG GKS +  ++M+L+    
Sbjct: 3   PLLEIQDLRVTFPGHQ----AVRGLDLALNPGETLALVGESGCGKSATALSIMRLVGAPG 58

Query: 65  RIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHR 124
           ++     I+F G++LL   +T MR++RG+ I MIFQEPMTSLNP + +G Q+ E +R H+
Sbjct: 59  QV--AGRILFNGQDLLALPNTAMRQLRGNAISMIFQEPMTSLNPVLTIGQQIVETLRTHQ 116

Query: 125 NVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEP 184
            ++  QA+ R +EL  LV +P+P      +PH+ SGGQ QR+MIAMA+  +P +LIADEP
Sbjct: 117 PLTPAQARARAIELLDLVKIPEPPRRIDDYPHQLSGGQRQRVMIAMAVACQPTLLIADEP 176

Query: 185 TTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQ 244
           TTALDVT+QA++L L+ +++  + M++L ITHDLGVV+  ADRV VM  G  VE+ STE 
Sbjct: 177 TTALDVTIQAQILALLDQLRRELSMSLLLITHDLGVVEQWADRVAVMVGGRKVEEASTEV 236

Query: 245 LFLQPEHDYTRMLINSI---------------------------------PKGSKDPVAV 271
           LF QP+H YTR L+ +                                  P  S  P   
Sbjct: 237 LFQQPQHPYTRGLLATSLHLAGDLHYRRQRLPEIRHPDNGDAGQVTVVTPPLRSVPPPDT 296

Query: 272 DAAPLLKAEDIRVKFLVKPYFISRRNQYFEAVKGISLELKQGETLGIVGESGSGKSTLGR 331
             APLL    +  ++      ++       AVK ISL++  GETLG+VGESG GKSTL +
Sbjct: 297 TRAPLLSLHRVHTRYATPQGVVT-------AVKDISLDIYPGETLGLVGESGCGKSTLSK 349

Query: 332 ALIGLLP-STGQIAFKGQDFRALSEKQRLALKKDIQMVFQDPYGSLSPRMTVGEIITEGL 390
            ++ LLP + G++ F GQD   L+E+Q   L++ +QM+FQDPY SL+PR  V  I+   L
Sbjct: 350 TILRLLPVAAGRMLFDGQDITPLNERQLQPLRRRVQMIFQDPYASLNPRHDVQRILERPL 409

Query: 391 LVHQPHISKLERMQRARRALEEVRLDPNSINRYPHEFSGGQRQRIAIARALILEPSFILL 450
           +VH     + +R +   +ALE VRL  +S+ RYPHEFSGGQRQRI IARAL++ PS ++ 
Sbjct: 410 IVHGV-TRRAQRQRLISQALERVRLPQSSLQRYPHEFSGGQRQRIGIARALVVNPSLVIC 468

Query: 451 DEPTSALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVMQKGQVMEQGS 510
           DEP SALD S+Q  ++ LL E++    +  LFISHDL+VV+ ++DRV+VMQ G+ +E G 
Sbjct: 469 DEPVSALDVSIQAQILNLLVELKSEMGLSLLFISHDLSVVRYIADRVMVMQHGECVESGD 528

Query: 511 AESIFHNPQHEYTKKLI 527
            + I+  PQH YT+ L+
Sbjct: 529 CQQIWRQPQHPYTRLLL 545



 Score =  216 bits (551), Expect = 1e-60
 Identities = 110/258 (42%), Positives = 173/258 (67%), Gaps = 8/258 (3%)

Query: 5   PLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNA 64
           PLL +  +   + T  GVV AVK++S DI PGETL +VGESG GKS  +  +++LLP  A
Sbjct: 300 PLLSLHRVHTRYATPQGVVTAVKDISLDIYPGETLGLVGESGCGKSTLSKTILRLLPVAA 359

Query: 65  RIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHR 124
                  ++F+G+++    + Q++ +R  R+ MIFQ+P  SLNP   V   +   +  H 
Sbjct: 360 -----GRMLFDGQDITPLNERQLQPLRR-RVQMIFQDPYASLNPRHDVQRILERPLIVHG 413

Query: 125 NVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEP 184
              + Q ++ + +  + V LP  + + Q++PHEFSGGQ QRI IA AL+  P ++I DEP
Sbjct: 414 VTRRAQRQRLISQALERVRLP--QSSLQRYPHEFSGGQRQRIGIARALVVNPSLVICDEP 471

Query: 185 TTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQ 244
            +ALDV++QA++L L+ E+++ MG+++LFI+HDL VV+++ADRV+VM  G+ VE G  +Q
Sbjct: 472 VSALDVSIQAQILNLLVELKSEMGLSLLFISHDLSVVRYIADRVMVMQHGECVESGDCQQ 531

Query: 245 LFLQPEHDYTRMLINSIP 262
           ++ QP+H YTR+L++S+P
Sbjct: 532 IWRQPQHPYTRLLLDSVP 549



 Score =  187 bits (475), Expect = 9e-52
 Identities = 106/266 (39%), Positives = 162/266 (60%), Gaps = 19/266 (7%)

Query: 275 PLLKAEDIRVKFLVKPYFISRRNQYFEAVKGISLELKQGETLGIVGESGSGKSTLGRALI 334
           PLL+ +D+RV F              +AV+G+ L L  GETL +VGESG GKS    +++
Sbjct: 3   PLLEIQDLRVTF-----------PGHQAVRGLDLALNPGETLALVGESGCGKSATALSIM 51

Query: 335 GLLPSTGQIA----FKGQDFRALSEKQRLALKKD-IQMVFQDPYGSLSPRMTVGEIITEG 389
            L+ + GQ+A    F GQD  AL       L+ + I M+FQ+P  SL+P +T+G+ I E 
Sbjct: 52  RLVGAPGQVAGRILFNGQDLLALPNTAMRQLRGNAISMIFQEPMTSLNPVLTIGQQIVET 111

Query: 390 LLVHQPHISKLERMQRARRALEEVRLD--PNSINRYPHEFSGGQRQRIAIARALILEPSF 447
           L  HQP ++  +   RA   L+ V++   P  I+ YPH+ SGGQRQR+ IA A+  +P+ 
Sbjct: 112 LRTHQP-LTPAQARARAIELLDLVKIPEPPRRIDDYPHQLSGGQRQRVMIAMAVACQPTL 170

Query: 448 ILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVMQKGQVME 507
           ++ DEPT+ALD ++Q  ++ LL ++++  ++  L I+HDL VV+  +DRV VM  G+ +E
Sbjct: 171 LIADEPTTALDVTIQAQILALLDQLRRELSMSLLLITHDLGVVEQWADRVAVMVGGRKVE 230

Query: 508 QGSAESIFHNPQHEYTKKLIAASFDI 533
           + S E +F  PQH YT+ L+A S  +
Sbjct: 231 EASTEVLFQQPQHPYTRGLLATSLHL 256