Pairwise Alignments

Query, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 597 a.a., ABC transporter ATP-binding protein from Dickeya dadantii 3937

 Score =  437 bits (1123), Expect = e-127
 Identities = 234/549 (42%), Positives = 346/549 (63%), Gaps = 26/549 (4%)

Query: 5   PLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNA 64
           P+L+V  L+ +F  N   +  V+++SF+I   ET+A+VGESGSGKSV+  ++M+LL    
Sbjct: 4   PVLRVEQLNTAFRVNGEWLKVVQDLSFEIGERETVALVGESGSGKSVTALSIMRLLG-GP 62

Query: 65  RIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHR 124
           ++     ++F+G +LL     +M+ IRG+RIGM+FQEPMTSLNP +++G Q+ E +R HR
Sbjct: 63  QVQTRGRVLFDGRDLLALPAREMQHIRGNRIGMVFQEPMTSLNPVLKIGTQITEVLRRHR 122

Query: 125 NVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEP 184
            +    A+     L + V +P  +    ++P  FSGG  QR++IA+AL   P +LI DEP
Sbjct: 123 GMDHAGARAEAARLLERVRIPAARSRLDEYPLSFSGGMRQRVVIAIALACNPRLLIVDEP 182

Query: 185 TTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQ 244
           TTALDVT+QA++L LIK +Q   GM+ILFITHD+GVV  VADR +VM  G  VE   T Q
Sbjct: 183 TTALDVTIQAQILALIKTLQDEEGMSILFITHDMGVVAEVADRTMVMYHGAGVEMADTRQ 242

Query: 245 LFLQPEHDYTRMLINSIPK--------------------GSKDPVA---VDAAPLLKAED 281
           LF  P+H Y++ L +++P+                     + +P+A       P+L   D
Sbjct: 243 LFRAPQHPYSKTLFSAVPRLGEMADTRLPRRFALFGQSAAASEPLADTVTPGEPVLAVRD 302

Query: 282 IRVKFLVKPYFISRRNQYFEAVKGISLELKQGETLGIVGESGSGKSTLGRALIGLL-PST 340
           +  +F VK  ++ R      AV+ +S  L+ GETL +VGESG GKST GRA++ LL P+ 
Sbjct: 303 LIKRFDVKSGWLRRVTGRVHAVENVSFSLQPGETLSLVGESGCGKSTTGRAILRLLEPNG 362

Query: 341 GQIAFKGQDFRALSEKQRLALKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKL 400
           G ++  G++           L+   QM+FQDPY SL+PR+TVG  I E ++ H    S  
Sbjct: 363 GAVSLCGENMLTAGTSALAGLRMRAQMIFQDPYDSLNPRLTVGSAIAEPMISH-GLASAR 421

Query: 401 ERMQRARRALEEVRLDPNSINRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRS 460
           +  Q+  + LE+V L  +   RYPH+FSGGQRQR+ IARAL L P  I+ DE  SALD +
Sbjct: 422 QAPQKVAQLLEKVGLQADMAARYPHQFSGGQRQRLCIARALALNPQVIIADEALSALDMT 481

Query: 461 VQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQH 520
           V+  ++ LL ++Q++  + YLFISHD+AVV+ +S RV VM +G+++E G  +++F++PQH
Sbjct: 482 VKAQIVNLLLDLQQQLGLAYLFISHDMAVVERISHRVAVMYQGEIVEIGPRQAVFNDPQH 541

Query: 521 EYTKKLIAA 529
            YT++L+AA
Sbjct: 542 PYTRRLLAA 550



 Score =  195 bits (495), Expect = 5e-54
 Identities = 110/265 (41%), Positives = 165/265 (62%), Gaps = 15/265 (5%)

Query: 5   PLLQVRNLSVSFTTNDGV-------VDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALM 57
           P+L VR+L   F    G        V AV+NVSF ++PGETL++VGESG GKS +  A++
Sbjct: 296 PVLAVRDLIKRFDVKSGWLRRVTGRVHAVENVSFSLQPGETLSLVGESGCGKSTTGRAIL 355

Query: 58  QLLPKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVA 117
           +LL  N       ++   GE +L    + +  +R  R  MIFQ+P  SLNP + VG  +A
Sbjct: 356 RLLEPNG-----GAVSLCGENMLTAGTSALAGLRM-RAQMIFQDPYDSLNPRLTVGSAIA 409

Query: 118 EAIRCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPD 177
           E +  H   S  QA Q+V +L + V L     A  ++PH+FSGGQ QR+ IA AL   P 
Sbjct: 410 EPMISHGLASARQAPQKVAQLLEKVGLQADMAA--RYPHQFSGGQRQRLCIARALALNPQ 467

Query: 178 ILIADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVV 237
           ++IADE  +ALD+TV+A+++ L+ ++Q  +G+A LFI+HD+ VV+ ++ RV VM +G++V
Sbjct: 468 VIIADEALSALDMTVKAQIVNLLLDLQQQLGLAYLFISHDMAVVERISHRVAVMYQGEIV 527

Query: 238 EQGSTEQLFLQPEHDYTRMLINSIP 262
           E G  + +F  P+H YTR L+ ++P
Sbjct: 528 EIGPRQAVFNDPQHPYTRRLLAAVP 552