Pairwise Alignments

Query, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

 Score =  494 bits (1272), Expect = e-144
 Identities = 268/529 (50%), Positives = 355/529 (67%), Gaps = 14/529 (2%)

Query: 6   LLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNAR 65
           LL+VRNLSV F T  G V AV+N+S+ +  GETLAI+GESGSGKSVS++A+M L+     
Sbjct: 5   LLEVRNLSVDFYTATGTVKAVRNISYHVDRGETLAILGESGSGKSVSSSAIMNLIDMPPG 64

Query: 66  IHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHRN 125
                 I+  G++LL  +    R + G  I MIFQ+P++ LNP   VG Q+ EA+R H  
Sbjct: 65  KISSGEILLNGKDLLKMSADDRRAVNGRLIAMIFQDPLSHLNPVYTVGWQMREALRTH-G 123

Query: 126 VSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEPT 185
           +   QA+   L LF+ V LP+P+ A  K+PHEFSGGQ QR+MIAMAL  +P++LIADEPT
Sbjct: 124 IDNRQAQVEALRLFKRVALPEPEKAVDKYPHEFSGGQRQRVMIAMALALKPNLLIADEPT 183

Query: 186 TALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQL 245
           TALDVTVQAEVL L+KE+Q   GM +L ITHDLGVV  VADRV+VM KG +VE G+  ++
Sbjct: 184 TALDVTVQAEVLALLKELQRETGMGVLIITHDLGVVSEVADRVVVMEKGVLVESGTVREV 243

Query: 246 FLQPEHDYTRMLINSIP-KGSKDPVAVDAAPLLKAEDIRVKFLVKPYFISRRNQYFEAVK 304
           +  P+H YT+ LI + P KG     + D  P+LK  + R  +             FEA+K
Sbjct: 244 YRNPQHPYTKKLIAAAPGKGQLHEPSTDGEPILKVRNARKSY-----------GGFEALK 292

Query: 305 GISLELKQGETLGIVGESGSGKSTLGRALIGLL-PSTGQIAFKGQDFRALSEKQRLALKK 363
           GIS +LK GET+ +VGESGSGKSTL R L+ L  P +G   +KGQD   LS  +   L++
Sbjct: 293 GISFDLKAGETVAVVGESGSGKSTLARILLRLDDPDSGTAHWKGQDLFTLSPSELFKLRR 352

Query: 364 DIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPNSINRY 423
           D+QMVFQDP  SL+PRMTV ++I+E  ++H   + K +   RA   LE V L P  + RY
Sbjct: 353 DLQMVFQDPTQSLNPRMTVYQLISEAWVIHPEILPKAKWRARAAELLERVGLSPEHMGRY 412

Query: 424 PHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYLFI 483
           PH+FSGGQRQRIAIARAL LEP  I+ DE  SALD SVQ  V+ LL ++++   I ++FI
Sbjct: 413 PHQFSGGQRQRIAIARALALEPQLIVCDEAVSALDVSVQAQVVRLLDKLRREMGIAFIFI 472

Query: 484 SHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAASFD 532
           +HDL +V+  +D V+VMQKG+V+E G+   +F NPQ  YT+ LI+A+ D
Sbjct: 473 AHDLPLVRDFADYVMVMQKGEVVEFGTVAQVFDNPQQRYTQALISATLD 521