Pairwise Alignments

Query, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., putative ABC transporter ATP-binding protein YejF from Acinetobacter radioresistens SK82

 Score =  459 bits (1181), Expect = e-133
 Identities = 253/529 (47%), Positives = 362/529 (68%), Gaps = 20/529 (3%)

Query: 7   LQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNARI 66
           LQV  L++    N+     V+N++F +  G+TLAIVGESGSGKS+S+ AL+ LLP N ++
Sbjct: 16  LQVEQLNIQ---NEQGEVLVENLNFYLYAGQTLAIVGESGSGKSISSLALLGLLPANLKV 72

Query: 67  HPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHRNV 126
             + S + + + LLN ++T  R+IRG +I MIFQEPMT+LNP  RV   + E++   +  
Sbjct: 73  --QGSAILDSQNLLNLSETAKRQIRGHKIAMIFQEPMTALNPLHRVEKIIGESLYL-QGW 129

Query: 127 SQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEPTT 186
           S++Q +QRV+EL   V +  P+   Q++PHE SGGQ QR+MIAMAL  +PDILIADEPTT
Sbjct: 130 SKDQVRQRVVELLHDVGITHPEDKLQRYPHELSGGQRQRVMIAMALALDPDILIADEPTT 189

Query: 187 ALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQLF 246
           ALDVT+QA++L+L++ +Q    MA++ I+HDL +VK  A +V+VM +G V EQGS EQ+F
Sbjct: 190 ALDVTLQAQILKLLQSLQHRRNMAMILISHDLNIVKRCAQQVVVMNQGRVEEQGSAEQIF 249

Query: 247 LQPEHDYTRMLI-----NSIPKGSKDPVAVDAAPLLKAEDIRVKFLVKPYFISRRNQYFE 301
            QP+ +YTR L+      ++P  +        + LL+ E + V F ++   ++R   YF 
Sbjct: 250 KQPKAEYTRHLLAHNFGQALPSSA-------GSELLRLEQVSVCFPIRQGLLNRVKDYFV 302

Query: 302 AVKGISLELKQGETLGIVGESGSGKSTLGRALIGLLPSTGQIAFKGQDFRALSEKQRLAL 361
           AV+ ++L L+QG+++GIVGESGSGK++L  A+  L+ S GQI    QD   LSEK+   L
Sbjct: 303 AVEPLNLVLRQGDSIGIVGESGSGKTSLALAIARLIESKGQIFLMEQDLNLLSEKKLRLL 362

Query: 362 KKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPNSIN 421
           + D Q+VFQDP+ SL+PRMTV +II EGL  +  H   L   ++  + L+ V L  +   
Sbjct: 363 RTDFQIVFQDPFSSLNPRMTVEQIIGEGL--NLKHHMPLAVTEQIDQILQTVELPVHFKQ 420

Query: 422 RYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYL 481
           RYPHE SGGQRQR+A+ARALIL+P  I+LDEPTSALDR+ Q  +++LL+ +Q+   + YL
Sbjct: 421 RYPHELSGGQRQRVALARALILKPKLIILDEPTSALDRTTQRAIVQLLRNLQQEYQLSYL 480

Query: 482 FISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAAS 530
           FISHDL VV+AL  +V+V++  Q++E    E +F NPQ EYT++LIAAS
Sbjct: 481 FISHDLQVVRALCQQVMVLRHAQLVEFQDTEQLFSNPQSEYTRQLIAAS 529



 Score =  177 bits (448), Expect = 1e-48
 Identities = 103/236 (43%), Positives = 148/236 (62%), Gaps = 9/236 (3%)

Query: 303 VKGISLELKQGETLGIVGESGSGKSTLGRALIGLLPST----GQIAFKGQDFRALSEKQR 358
           V+ ++  L  G+TL IVGESGSGKS    AL+GLLP+     G      Q+   LSE  +
Sbjct: 32  VENLNFYLYAGQTLAIVGESGSGKSISSLALLGLLPANLKVQGSAILDSQNLLNLSETAK 91

Query: 359 LALK-KDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLD- 416
             ++   I M+FQ+P  +L+P   V +II E L +     SK +  QR    L +V +  
Sbjct: 92  RQIRGHKIAMIFQEPMTALNPLHRVEKIIGESLYLQG--WSKDQVRQRVVELLHDVGITH 149

Query: 417 -PNSINRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKR 475
             + + RYPHE SGGQRQR+ IA AL L+P  ++ DEPT+ALD ++Q  +++LL+ +Q R
Sbjct: 150 PEDKLQRYPHELSGGQRQRVMIAMALALDPDILIADEPTTALDVTLQAQILKLLQSLQHR 209

Query: 476 RNIGYLFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAASF 531
           RN+  + ISHDL +VK  + +V+VM +G+V EQGSAE IF  P+ EYT+ L+A +F
Sbjct: 210 RNMAMILISHDLNIVKRCAQQVVVMNQGRVEEQGSAEQIFKQPKAEYTRHLLAHNF 265