Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  231 bits (590), Expect = 5e-65
 Identities = 162/505 (32%), Positives = 269/505 (53%), Gaps = 12/505 (2%)

Query: 63  ADNTHALVRYKDT-IAQIDDTIYPLRISAVYAIYDAERRNNFIAELREGLTEVQSALSSI 121
           AD  +A +   +T + Q+ D+   L  +   A+ DA+ +         G T   S  +  
Sbjct: 141 ADIANAQINALETSVKQMPDSSEHL--AQFQAVADAKMQFQLARYEVRGYTGNVSPETEA 198

Query: 122 EQDAQFSRDVPVVKQSIEIYVAESQK-MVALFNRLD---QGLATREEANVFIQSFRETGN 177
              AQ  + +  +K     + A  Q  + AL   L      +   + AN  I + R    
Sbjct: 199 RAAAQIEKAIAGLKDLNATFGASQQSALTALETALGAYRSAVQNYKAANANIVTARAEMT 258

Query: 178 RMISAINDLSQKVNHYATTSME-QSAQSNAVVMRNAMITVLSVLMLSVLAAWLLSGQIVA 236
              + I  +S K+     T  + +SAQ+ ++     +I+ L  L++ V+AA +++ QI  
Sbjct: 259 TQGADIVTISDKLYEIQLTRRDAESAQARSL----QLISTLLALLVGVIAALVITRQITR 314

Query: 237 PINSLQSVMRKLAQGDLSVKADADGENEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASA 296
           PI    +V+ ++A GDLS        +E+  L Q +    T L   +  +     ++ASA
Sbjct: 315 PIQETLAVVERIASGDLSHNIQVTRRDELGVLQQGIQRMGTTLRELISGIRDGVTQIASA 374

Query: 297 STELAAVMTQAESNAQMELMEIEQVASAVNELASTADNVSDNASSADATAREADELAKSG 356
           + EL+AV  Q  +    + +E +QVA+A++E+ +T   V+ NA  A   A +AD  A++G
Sbjct: 375 AEELSAVTEQTSAGVNSQKIETDQVATAMHEMTATVQEVARNAEQASLAAADADGQARAG 434

Query: 357 LAIFKESSQASEQMALALNDAARVVLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEA 416
             +  E+    E++A  +  +   +  L+++S +I +V++VI+ V++QTNLLALNAAIEA
Sbjct: 435 DKVVAEAIAQIERLAAEVARSTDAMTHLQQESNKIGSVMDVIKAVAEQTNLLALNAAIEA 494

Query: 417 ARAGESGRGFAVVADEVRMLAARTQASTKEIQAIIEELQTQSTMANDSMQTSLDMLTQNK 476
           ARAGE+GRGFAVVADEVR LA RTQ ST+EI+ ++  LQ  +    + M  S  +   + 
Sbjct: 495 ARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLVAGLQNGTQQVANVMNNSRSLTDSSV 554

Query: 477 ALTAKANDALIGITESVSDINDSNAQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGIS 536
            LT KA  +L  IT +VS+I   N Q+A AAEQQS V ++I+R++ N+  +  Q  T   
Sbjct: 555 ELTRKAGVSLENITRTVSNIQSMNQQIAAAAEQQSAVAEEISRSIVNVRDVSEQTATASD 614

Query: 537 QSASASNELSHLAEKQKAQLSFFKL 561
           ++A +S EL+ L  + +  +S F++
Sbjct: 615 ETAKSSVELARLGSQLQQMVSHFRV 639