Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  198 bits (503), Expect = 5e-55
 Identities = 121/304 (39%), Positives = 187/304 (61%), Gaps = 11/304 (3%)

Query: 259 ADGENEIAKLSQD--VNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQMELM 316
           A    E++ LSQ+  + T +T+L  T E L   +++ A ++T    +   + S  + + +
Sbjct: 224 AQARLEMSILSQEARLKTCLTRLQDTAEHL---NDQAAQSNT----LAHNSSSGLERQRV 276

Query: 317 EIEQVASAVNELASTADNVSDNAS-SADATAREADELAKSGLAIFKESSQASEQMALALN 375
           E EQVA+AVN++A+T   V+ +   +ADAT +EA+ L   G  I  E+ +A +++++A+ 
Sbjct: 277 ETEQVATAVNQMAATTQEVASHVQRTADAT-QEANRLTGRGRDIAGETREAIQRLSVAVG 335

Query: 376 DAARVVLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRM 435
           +    V +L + S++I  V++VI+G++DQTNLLALNAAIEAARAGE GRGFAVVADEVR 
Sbjct: 336 ETGVTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQ 395

Query: 436 LAARTQASTKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVSD 495
           LA RT  ST +I A+I +LQ  +  A  +M        +  A   +A+ AL+GI+E+V+ 
Sbjct: 396 LAQRTAESTGQIHALIAKLQQTAAAAVQTMDAGHRQAEEGVARVMEADQALVGISEAVAH 455

Query: 496 INDSNAQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQ 555
           I D   Q+A A E+QS V ++I+RN+S ++ L  Q       SA  S EL+H A  Q + 
Sbjct: 456 ITDMTTQIAAATEEQSSVAEEISRNISTIALLADQTSEQAMNSAQLSEELTHTANTQYSL 515

Query: 556 LSFF 559
           +  F
Sbjct: 516 VERF 519