Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  233 bits (594), Expect = 2e-65
 Identities = 154/466 (33%), Positives = 259/466 (55%), Gaps = 22/466 (4%)

Query: 118 LSSIEQDAQF-------SRDVPVVKQSIEIYVAESQKMVALFNRLD-QGLATREEANVFI 169
           LS + Q A+F       S  V   + +++      +K+  L  +L  Q  A  EEA+  +
Sbjct: 173 LSKLIQQARFQVRGYTYSAKVEAEQPALDAIDNAVKKITELQGQLPAQYQANLEEASTSL 232

Query: 170 QSFR-------ETGNRMISAINDLSQK----VNHYATTSMEQSAQSNAVVMRNAMITVLS 218
           Q++R       ++     +A+  +S +    + H    ++ Q+   +A       + +L+
Sbjct: 233 QAYRAAVSQYRDSQTAAAAALKIMSAQGDTLLGHSDKLTLSQTVVRDADAAHAKQLLLLA 292

Query: 219 V---LMLSVLAAWLLSGQIVAPINSLQSVMRKLAQGDLSVKADADGENEIAKLSQDVNTT 275
               L+  ++AAW ++ QIV P+N    V +++A GDLS    +  ++E+ +L + + + 
Sbjct: 293 TVLALIFGLVAAWAITRQIVIPLNQTLQVAQRVASGDLSHNLTSMRQDELGQLQRAMQSM 352

Query: 276 VTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQMELMEIEQVASAVNELASTADNV 335
              L   +  ++    ++ASA+ +L+AV  Q  +    + +E +QVA+A+NE+A+T   V
Sbjct: 353 TVGLRELIGGISDGVTQIASAAEQLSAVTEQTSAGVNSQKVETDQVATAMNEMAATVQEV 412

Query: 336 SDNASSADATAREADELAKSGLAIFKESSQASEQMALALNDAARVVLRLKEQSEQISNVI 395
           + NA  A   A  AD+ A+ G  +  E+    E++A  + ++   +  LK +S++I +V+
Sbjct: 413 ARNAEEASEAAVAADQQAREGDKVVGEAIAQIERLATEVGNSTVAMGDLKRESDKIGSVL 472

Query: 396 EVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQASTKEIQAIIEELQ 455
           +VI+ V+ QTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ ST+EI+ +I  LQ
Sbjct: 473 DVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEELIVGLQ 532

Query: 456 TQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVSDINDSNAQVATAAEQQSHVTQ 515
           + +      M  S  +   +  L  +A  AL  IT +VS I   N+Q+ATAAEQQS V +
Sbjct: 533 SGTQQVATIMDNSRGLTDSSVELPRRAGSALASITRTVSTIQAMNSQIATAAEQQSAVAE 592

Query: 516 DINRNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQLSFFKL 561
           +INR+V N+  +  Q      ++A++S EL+ L    +A +  F++
Sbjct: 593 EINRSVLNVRDVSEQTAAASEETAASSTELARLGTHLQALVGRFRV 638