Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  238 bits (607), Expect = 4e-67
 Identities = 174/534 (32%), Positives = 288/534 (53%), Gaps = 13/534 (2%)

Query: 23  SLKNLSIRLQVLLPVLFTMIALVIALWITKVN-LTHEQQAIADNTHALVRYKDTIAQIDD 81
           SL+ L+I  +  L   F  + LVI L +  VN +   +Q+  + T   +    ++  I +
Sbjct: 2   SLRQLNIAPRAFLGFAFIAL-LVILLGVFAVNRMAQIRQSSVEMTATQLPSVTSLGVITE 60

Query: 82  TIYPLRISAVYAIYDAERRNNFIAELREGLT--EVQSALSSIEQDAQFSRDVPVVKQ--- 136
            +  LRI +   + + E  +   AE R G+   +V++A +S         +  + K    
Sbjct: 61  NVLRLRILSFRVLVNREPASLQEAETRIGVLVDKVKTAQASYAALPAGPEEAALYKTFMV 120

Query: 137 SIEIYVAESQKMVALFNRLDQGLATREEANVFIQSFRETG-NRMISAINDLSQKVNHYAT 195
           +++ Y+     M+AL     QG    +E    I S  + G ++M   +N L       A 
Sbjct: 121 TLDNYLKAQADMLALSK---QGKV--DEMRALINSRIKDGTDQMGEQLNKLIAINVADAK 175

Query: 196 TSMEQSAQSNAVVMRNAMITVLSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLAQGDLSV 255
           T+   + QS    +   +   ++  +L+VL AWLL+  IV P+     V   +A G+LS 
Sbjct: 176 TADTDAGQSYDGAITGVIAVSVAAALLTVLLAWLLTRSIVTPLRKAVEVAETIAGGNLSK 235

Query: 256 KADADGENEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQMEL 315
             + DG++E A+L   + T    L  T++ +   + ++ASA+ EL+AV  +A    Q + 
Sbjct: 236 AIEDDGKDEPARLLGALATMQANLRQTIQHIAGSATQLASAAEELSAVTEEASKGLQQQN 295

Query: 316 MEIEQVASAVNELASTADNVSDNASSADATAREADELAKSGLAIFKESSQASEQMALALN 375
            EI+Q A+AVNE+ +  + V+ NA S    + ++++ A+ G     E+  A + M   + 
Sbjct: 296 NEIDQAATAVNEMTAAVEEVARNAVSTSEASSQSNQAAREGRDRVVETVGAIQTMTQDVQ 355

Query: 376 DAARVVLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRM 435
           + A ++  L  Q   I  V++VIR +++QTNLLALNAAIEAARAGE+GRGFAVVADEVR 
Sbjct: 356 NTAAMIEGLATQGRDIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRA 415

Query: 436 LAARTQASTKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVSD 495
           LA RT  ST+EI+ ++  +Q  +  A  SMQ S         +   A  AL  IT+S+S 
Sbjct: 416 LAHRTAQSTQEIEKMVAGIQNGTGEAVQSMQQSNQRTQTTLEMARAAGVALEQITQSISL 475

Query: 496 INDSNAQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLA 549
           IN+ N  +A+A+E+Q+ V+++++RN+ N+  L  Q+  G +Q+++AS+ELS LA
Sbjct: 476 INERNLVIASASEEQAQVSREVDRNLVNIRDLATQSAAGANQTSAASHELSRLA 529