Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  213 bits (541), Expect = 2e-59
 Identities = 129/362 (35%), Positives = 207/362 (57%), Gaps = 9/362 (2%)

Query: 205 NAVVMRNAMITVLSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLAQ-----GDLSVKADA 259
           N ++M    I +  +L++++L +W ++ Q+    N L ++   LA      GDL+ + D 
Sbjct: 282 NDMLMVQIGIGLGILLVMALLTSWFVARQL----NELGNIANALADIAEGDGDLTRRLDV 337

Query: 260 DGENEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQMELMEIE 319
             ++E+  L+   N  V +L+  V+ +  +S  +   +   AA  TQA    + +  EI 
Sbjct: 338 RSQDEVGLLADKFNKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEIT 397

Query: 320 QVASAVNELASTADNVSDNASSADATAREADELAKSGLAIFKESSQASEQMALALNDAAR 379
            VA+AV E+AS    ++ NA +    A ++ +L + G A  ++S Q+ +Q+A  L  A R
Sbjct: 398 MVATAVTEMASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVR 457

Query: 380 VVLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAAR 439
           ++  L+  + +IS ++  IRG+++QTNLLALNAAIEAARAGE GRGFAVVADEVR+L+ R
Sbjct: 458 IISELEVHANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQR 517

Query: 440 TQASTKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVSDINDS 499
           T AST+EIQ  I  LQ  +T A   M  S  ++  + A   +   +L  I+E++  I+D 
Sbjct: 518 THASTEEIQTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDM 577

Query: 500 NAQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQLSFF 559
             Q+A+AAE+QS VT DIN N  ++  +  Q      QS   +  L  +A++   ++S F
Sbjct: 578 ATQIASAAEEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRF 637

Query: 560 KL 561
           KL
Sbjct: 638 KL 639