Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  219 bits (558), Expect = 3e-61
 Identities = 126/365 (34%), Positives = 212/365 (58%), Gaps = 3/365 (0%)

Query: 199 EQSAQSNAVVMRNAMITVLSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLAQGD--LSVK 256
           E  A+ +AV  R  M+T L+V  + +     L+  I  PIN +      L +GD  LS +
Sbjct: 281 EVFAELDAVAQR-MMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQR 339

Query: 257 ADADGENEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQMELM 316
            +  G +EIA+LS+  N  + +++ +++ + + S E+  A+  ++        N+Q +  
Sbjct: 340 IEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRD 399

Query: 317 EIEQVASAVNELASTADNVSDNASSADATAREADELAKSGLAIFKESSQASEQMALALND 376
           +  QV +A+N++ +T   ++ NA++A  TA +A   A  G  +  ++ +A  ++A  + +
Sbjct: 400 QTIQVVTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIEN 459

Query: 377 AARVVLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRML 436
             +VV +L   +++I ++++ IRG+S+QTNLLALNAAIEAARAG+ GRGFAVVADEVR L
Sbjct: 460 TGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNL 519

Query: 437 AARTQASTKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVSDI 496
           A+RT +ST+EIQ +I +LQ  +  A  +M     +  Q  A + +A   L+ I++ + DI
Sbjct: 520 ASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDI 579

Query: 497 NDSNAQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQL 556
           +D N QVATA E+QS V   IN+N+  ++ +     +   + A AS  L  L+ +    +
Sbjct: 580 SDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLV 639

Query: 557 SFFKL 561
             FKL
Sbjct: 640 GNFKL 644