Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  208 bits (529), Expect = 5e-58
 Identities = 159/556 (28%), Positives = 271/556 (48%), Gaps = 34/556 (6%)

Query: 24  LKNLSIRLQVLLPV-LFTMIALVIALWITK---------VNLTHEQQAIADNTHALVRYK 73
           LKNLSI  ++     +  +I+L  A+++           +N T +     +N  A+    
Sbjct: 3   LKNLSIGKKIAASFSVIAVISLGFAIYLISELDKIQSELLNYTDDTLPAMENVDAIKDKM 62

Query: 74  DTIAQIDDTIYPLRISAVYAIYDAERRNNFIAELREGLTEVQSALSSIEQDAQFSRDVPV 133
               +    + P++  A       ER N   AE+ + L      +   E++  F R    
Sbjct: 63  SYWRRTQFAVLPMKDEAQIR-QTIERNNRVQAEINDSLVAYGKTVWPGEEEQTFKR---- 117

Query: 134 VKQSIEIYVAESQKMVALFNRLDQGLATR--EEANVFIQSFRETGNRMISAINDLSQKVN 191
                   +       A+ ++ +Q L T+  ++A   + +   T   + S    L   ++
Sbjct: 118 -------LMGNWNAYTAVTDQFNQTLLTQGADDAYPILANSLSTFEALESDFTLLIGILH 170

Query: 192 HYATTSMEQSAQSNAVVMRNAMITVLSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLAQG 251
               ++  Q   S   +   ++ + +++L + VL  WLL+  I  P+  +      +A+G
Sbjct: 171 QAMDSNKVQILSSVKTLNSTSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKG 230

Query: 252 DLSVKADAD--GENEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAES 309
           DLS   D    G +E+  L+         L   ++++     +++SA  E+  +  Q+  
Sbjct: 231 DLSQTMDRSSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSAD 290

Query: 310 NAQMELMEIEQVASAVNEL----ASTADNVSDNASSADATAREADELAKSGLAIFKESSQ 365
             + +  +I QVA+A+ ++    A  A N  D+AS A A   ++ E A+   ++ +    
Sbjct: 291 GMKEQQYQITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVR---- 346

Query: 366 ASEQMALALNDAARVVLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRG 425
           + +Q+A  + +A + V  L++QS QI+ V++VIR ++DQTNLLALNAAIEAARAGESGRG
Sbjct: 347 SIQQVADIIGEAGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRG 406

Query: 426 FAVVADEVRMLAARTQASTKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDA 485
           FAVVADEVR LA RTQ ST EI  IIE+LQ  +  A D+ + S   + +       +   
Sbjct: 407 FAVVADEVRTLAGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSL 466

Query: 486 LIGITESVSDINDSNAQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNEL 545
           +I I ES+++I D   Q+A+A  +Q  V  +++RNV N+     +   G  Q+A A  EL
Sbjct: 467 MISIEESIANIADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACREL 526

Query: 546 SHLAEKQKAQLSFFKL 561
           + LA   +  L  FK+
Sbjct: 527 TQLAVSLQDTLRRFKI 542