Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

 Score =  202 bits (514), Expect = 3e-56
 Identities = 121/338 (35%), Positives = 202/338 (59%), Gaps = 9/338 (2%)

Query: 228 WLLSGQIVAPINSLQSVMRKLAQGDLSVKADADGENEIAKLSQDVNTTVTQLYTTVEQLT 287
           W+LS ++ + +  ++  +  L+ G +  +      NE+  ++Q +     +L   V    
Sbjct: 284 WVLSKEL-SGVRQIREWILALSDGQIKERRPIKFHNELDTIAQSLENLQFRLLDVVRNSH 342

Query: 288 RISEEVASASTELAAVMTQAESNAQMELMEIEQVASAVNELASTADNVSDNASSADATAR 347
           R   +++   T++   +    +N+Q EL  IEQVA+A  +L+ T+ +V   A SA+  A 
Sbjct: 343 RTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVMQQAQSAELNAE 402

Query: 348 EADELAKSGLAIFKESSQASEQMALALNDAARVVLRLKEQSEQISNVIEVIRGVSDQTNL 407
            A +L      I   SS+ +E + L+++++ +++ +L+E S+ IS+V +VI  +SDQTNL
Sbjct: 403 TAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTDVINNISDQTNL 462

Query: 408 LALNAAIEAARAGESGRGFAVVADEVRMLAARTQASTKEIQAIIEELQTQSTMANDSMQT 467
           LALNAAIEAARAGE GRGFAVVADEVR LA +TQ ST +IQ II +LQ QS +A+  M  
Sbjct: 463 LALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLADQVMTR 522

Query: 468 SLDMLTQNKALTAKANDALIG----ITESVSDINDSNAQVATAAEQQSHVTQDINRNVSN 523
           ++ ++ +    T  AN ALI     I++ V +I++ N+ V+TAA +Q  VT+D+ + + +
Sbjct: 523 NVSLIHE----TQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQMED 578

Query: 524 MSTLVHQNVTGISQSASASNELSHLAEKQKAQLSFFKL 561
           +  LV +N++ + ++  A+  +S L       LSFFK+
Sbjct: 579 IRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616