Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  207 bits (526), Expect = 1e-57
 Identities = 136/425 (32%), Positives = 223/425 (52%), Gaps = 17/425 (4%)

Query: 142 VAESQKMVALFNRLDQGLATREEAN---VFIQSFRETGNRMISAINDLSQKVNHYATTSM 198
           +++S     L NR    +AT + A    +F  ++ E     + A     Q   H    S+
Sbjct: 224 ISDSSTSGQLLNRQGFAMATSDAAGDTQLFASTYVEKAGWYVVA-----QVPEHELYASL 278

Query: 199 EQSAQSNAVVMRNAMITVLSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLA--QGDLSVK 256
              +       R  +I  L +     L    L+G +  P+ SL  V ++L   QGDL  +
Sbjct: 279 NAGS-------RQIIIWALVIAGAFALIGIWLAGTLTKPLESLADVFQQLGRGQGDLRSR 331

Query: 257 ADADGENEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQMELM 316
                + EIA+L +  N  +  L+ T+ Q+ + S  + +++ ++A    Q E++ + +  
Sbjct: 332 IPMPEQKEIARLVEGFNNFIDHLHGTISQVAKTSHALKASAQDVAKQSHQTENSTKSQRD 391

Query: 317 EIEQVASAVNELASTADNVSDNASSADATAREADELAKSGLAIFKESSQASEQMALALND 376
           +  Q A+A+ E+ ST + V+ +A+ A   A  A   +  G  I + +  A   ++  + D
Sbjct: 392 QTLQAAAALTEMGSTVNEVAQSATHAAQNANMATTNSAHGREITQRAVHAINGLSGQIQD 451

Query: 377 AARVVLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRML 436
            +RV+  L E +  I  +++ IRG+S+QTNLLALNAAIEAARAG+ GRGF+VVADEVR L
Sbjct: 452 VSRVIQSLDEHTAAIGGILDTIRGISEQTNLLALNAAIEAARAGDHGRGFSVVADEVRTL 511

Query: 437 AARTQASTKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVSDI 496
           A R   +T EIQ  I++ Q  S  A   M++S    T     T + +  L  I E ++ I
Sbjct: 512 AQRAAQATDEIQVKIDKFQQDSKSAVSQMESSRARTTDVVTATNEIDKLLQDIAEEIAHI 571

Query: 497 NDSNAQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQL 556
           ND N QVATA E+Q+ V +DI+RN++++S    + +       S S++L  LA++  +++
Sbjct: 572 NDVNTQVATATEEQATVVEDISRNINDISASSEETLNATKILVSVSDKLDELAQELSSEV 631

Query: 557 SFFKL 561
           S FKL
Sbjct: 632 SRFKL 636