Pairwise Alignments

Query, 434 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., Multidrug resistance protein MdtH from Xanthobacter sp. DMC5

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 96/376 (25%), Positives = 148/376 (39%), Gaps = 55/376 (14%)

Query: 37  VWTVLIGTLFARTSFFMAWPFLVVFLYQDYHATATEVGAMLATSALVGSLTGLYSGYLSD 96
           VW + + ++F   S  M    L +FL     A+   VG +         +  ++SGYLSD
Sbjct: 26  VWALGLVSMFMDISSEMIHALLPLFLTGTLGASVAMVGLIEGIGESTAQVVKVFSGYLSD 85

Query: 97  KFGRKWVMVSGTLIATFAYTGIGLSNQIWQFFIMIVLTGLM----------RPMIEAPGK 146
           +FGR+  ++           G GL      FF +    G++          + M  AP  
Sbjct: 86  RFGRRKPLI---------LLGYGLGAASKPFFAIAGAPGMVLAARFADRVGKGMRGAPRD 136

Query: 147 AVIGDNLPDEKDRELALNVRYFLLNLGGAIGPLIGITLALAHP---QVLFIVTGIAYFLF 203
           A++ D  P E  R  A  +R  L  +G  +GPL+ I L        +V+F +  +   L 
Sbjct: 137 ALVADVTPSE-IRGRAYGLRQALDTVGAFVGPLLAIVLMALFADDMRVVFWIALVPGILA 195

Query: 204 GLWLLATLE-RKGRFQQPDR-------SLLPNFSATLRVISKDNVFVKMMLANFLMMF-V 254
            + ++A +E R     + DR        L     A   V++   VF    LA F   F V
Sbjct: 196 VVCVVAGVEDRAAGVAEGDRPPPVRLKDLKRLGRAFWGVVAVGVVFT---LARFSEAFLV 252

Query: 255 YGQVESSLPQVIVRSGIADAAQLVAGLVLVNTMTII--LFQFPTLKLLESVPLFTRTRLG 312
               +  LP V+            A LVLV  M ++  L  +P     +  P       G
Sbjct: 253 LKAHDEGLPLVL------------APLVLV-AMNVVYSLGAYPAGAWSDRAPPQRLLFGG 299

Query: 313 MALMGLAQVGFMFTPEAFPLGWYLACFVLSMGEVIAFPTLNVQIDRLAPAHLRGSYFGAA 372
           + L+  A +   F P   P G +L   +      +    L   +   APA LRGS FG  
Sbjct: 300 LVLLIAADIVLAFGP-GLP-GAFLGIILWGGHMALTQGLLAKLVAEHAPAALRGSAFG-- 355

Query: 373 ALYSLGFAIAPLAGGM 388
            L++L   +A LA  +
Sbjct: 356 -LFNLATGLATLAASL 370