Pairwise Alignments

Query, 434 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., Na(+), Li(+), K(+)/H(+) antiporter from Pseudomonas sp. DMC3

 Score =  135 bits (339), Expect = 3e-36
 Identities = 102/385 (26%), Positives = 177/385 (45%), Gaps = 7/385 (1%)

Query: 40  VLIGTLFARTSFFMAWPFLVVFLYQDYHATATEVGAMLATSALVGSLTGLYSGYLSDKFG 99
           ++I +L    S  +  P L +FL         +VG +L  +    +L  LY GY+ DK  
Sbjct: 9   LMISSLTVVISRALVSPLLTLFLSNKLGLNPQDVGLLLGIAVFSATLLSLYGGYIIDKLD 68

Query: 100 RKWVMVSGTLIATFAYTGIGLSNQIWQFFIMIVLTGLMRPMIEAPGKAVIGDNLPDEKDR 159
           ++ +++   L +      +  +  ++   ++++++     +     KA++ +NLP  + R
Sbjct: 69  KRQLLIVAMLSSGIGLILLTFAQNLYLVTLVLIISETASALFLIGSKAILSENLPVGQ-R 127

Query: 160 ELALNVRYFLLNLGGAIGPLIGITLALAHPQVLFIVTGIAYFLFGLWLLATLERKGRFQQ 219
             A ++ Y L N+G A+GP+IG+ +A   P   FIV G A  +  ++LL    R      
Sbjct: 128 VKAFSLNYTLTNIGYAVGPMIGVVIAGVQPSAPFIVAG-AIAIGSIFLLLGATRDAS-PI 185

Query: 220 PDRSLLPNFSATLRVISKDNVFVKMMLANFLMMFVYGQVESSLPQ-VIVRSGIADAAQLV 278
              +   +F  TL ++  D   V   L   L   V+G+    L Q ++V          +
Sbjct: 186 TSGTAPQSFLNTLMILKNDRTMVLFTLGCLLSTLVHGRFTLYLSQYLLVTHTQQQTLDTM 245

Query: 279 AGLVLVNTMTIILFQFPTLKLLESVPLFTRTRLGMALMGLAQVGFMFTPEAFPLGWYLAC 338
           A L+  N +T+IL Q+   + L    L      G AL  +  +GF        LGW +A 
Sbjct: 246 AALLACNAITVILLQYQVGRWLSREHLRHWIAGGTALFIVGLIGFSLADSL--LGWCVAM 303

Query: 339 FVLSMGEVIAFPTLNVQIDRLAPAHLRGSYFGAAALYSLGFAIAPLAGGMMIEYLNA-QW 397
           F+ ++GE+I +P   + +D LAP  LRGSY+GA  L +LG   +P+  G ++ +  A   
Sbjct: 304 FIFTLGEMIIYPADFLFVDTLAPEALRGSYYGAQNLAALGGGASPVLCGFLLMHTPAPSM 363

Query: 398 LYGLCFVLCLAMMGLYYLAQREQEM 422
            Y L  +  L     +  A+R   M
Sbjct: 364 FYALSGLAALGGYLCFVSARRTTSM 388