Pairwise Alignments

Query, 434 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., multidrug efflux MFS transporter MdtH from Serratia liquefaciens MT49

 Score = 77.8 bits (190), Expect = 6e-19
 Identities = 100/384 (26%), Positives = 163/384 (42%), Gaps = 25/384 (6%)

Query: 40  VLIGTLFARTSFFMAWPFLVVFLYQDYHATATEVGAMLATSALVGSLTGLYSGYLSDKFG 99
           +L+  L     FF+ +P + +         A  VGA L    L+    G++ G ++D+FG
Sbjct: 15  LLLDNLLVVLGFFVVFPLISIRFVDQLGWAAVVVGAALGLRQLIQQGLGIFGGAIADRFG 74

Query: 100 RKWVMVSGTLIATFAYTGIGLSNQIWQFFIMIVLTGLMRPMIEAPGKA-VIGDNLPDEKD 158
            K ++V+G L+    +  + +++Q W  +    L+ L   + + P  A VI    P E+ 
Sbjct: 75  AKPMIVTGMLMRAAGFATMAMADQPWILWFSCALSALGGTLFDPPRTALVIKLTRPHERG 134

Query: 159 RELALNVRYFLLNLGGAIGPLIGI-TLALAHPQVLFIVTGIAYFLFG--LWLLATLERKG 215
           R  +L +     + G  IG LIG   L      V ++  GI     G   WLL    R  
Sbjct: 135 RFYSLLMMQD--SAGAVIGALIGSWLLQYDFHFVCWVGAGIFVLAAGWNAWLLPAY-RIS 191

Query: 216 RFQQPDRSLLPNFSATLRVISKDNVFVK--MMLANFLMMFVYGQVESSLPQVIVRSGIAD 273
             + P +         +RV+ +D  F+   + L  + M+ V  QV   LP  IV + IA 
Sbjct: 192 TVRAPMK------EGMMRVL-RDRRFLTYVLTLTGYYMLSV--QVMLMLP--IVVNEIAG 240

Query: 274 AAQLVAGLVLVNTMTIILFQFPTLKLLES-VPLFTRTRLGMALMGLAQVGFMFTPEAFPL 332
           +   V  +  +     +   +P  +  E    L  R   G+ LM L+ +          +
Sbjct: 241 SPTAVKWMYAIEAALSLSLLYPIARWSEKRFRLEQRLMAGLLLMTLSLIPVGLATSLQGV 300

Query: 333 GWYLACFVLSMGEVIAFPTLNVQIDRLAPAHLRGSYFGAAAL-YSLGFAIAPLAGGMMIE 391
              + CF L  G +IA P        LA    RGSY G + L  +LG A+    GG M +
Sbjct: 301 FTLICCFYL--GSIIAEPARETLSASLADPRARGSYMGFSRLGLALGGAVGYTGGGWMYD 358

Query: 392 YLNAQWLYGLCFVLCLAMMGLYYL 415
             +A  +  L ++L L ++GL  L
Sbjct: 359 TGHAVGMPELPWIL-LGIVGLITL 381