Pairwise Alignments

Query, 434 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., Arabinose efflux permease from Enterobacter asburiae PDN3

 Score = 94.0 bits (232), Expect = 8e-24
 Identities = 91/353 (25%), Positives = 153/353 (43%), Gaps = 34/353 (9%)

Query: 56  PFLVVFLYQDYHATATEVGAMLATSALVGSLTGLYSGYLSDKFGRKWVMVSGTLIATFAY 115
           PF+ ++L + Y  +   +G  L  +  +G +  L  G L+DKF +K  M+   +     +
Sbjct: 28  PFMTIYLTRVYSMSVENIGYALTIALTIGVVFSLGFGILADKFDKKRYMLIAIVAFIAGF 87

Query: 116 TGIGLSNQIWQFFIMIVLTGLMRPMIEAPGKAVIGDNLP-DEKDRELALNVRYFLLNLGG 174
             I L + +    +   L      +     KA   D L   +K R  +LN  Y  LN+G 
Sbjct: 88  VAIPLVDNVTLVVLFFALINCAYSVFSTVLKAWFSDVLTASQKARVFSLN--YSFLNIGW 145

Query: 175 AIGPLIGITLALAHPQVLFIVTG---------IAYFLFGLWLLATLERKGRFQQPDRSLL 225
            IGP IG  L +   Q+ F +           I +F+     L T E K  +Q       
Sbjct: 146 TIGPPIGTLLVMYSLQLPFWLAAFCAALPLGFIHFFVQKSVALDTAEEKMPWQPS----- 200

Query: 226 PNFSATLRVISKDNVFVKMMLANFLMMFVYGQVESSLPQVIVRSGIAD--AAQLVAGLVL 283
                   V+ KD       L+  L  +V G   + + Q ++ +      A ++VA ++ 
Sbjct: 201 --------VLLKDRALFWYTLSGLLASYVGGSFATCISQYVLAAHADSNFAEKVVAVVLP 252

Query: 284 VNTMTIILFQFPTLKLLESV---PLFTRTRLGMALMGLAQVGFMFTPEAFPLGWYLACFV 340
           VN   ++  Q+   + + +    PL T   L   ++GL   GFM + E   + W +A  +
Sbjct: 253 VNAAVVVTLQYALGRKISASNIRPLMTLATL-FFIVGLG--GFMMSGENL-VYWGIAAAI 308

Query: 341 LSMGEVIAFPTLNVQIDRLAPAHLRGSYFGAAALYSLGFAIAPLAGGMMIEYL 393
            ++GE+I  P   + ID +AP  ++ SYF A AL  LG A  P+  G+++  L
Sbjct: 309 FTLGEIIYAPGEYMLIDNIAPPGMKASYFSAQALGWLGAAANPMITGIILTNL 361