Pairwise Alignments

Query, 434 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., multidrug efflux MFS transporter MdtH from Escherichia coli ECRC62

 Score = 83.2 bits (204), Expect = 1e-20
 Identities = 91/376 (24%), Positives = 157/376 (41%), Gaps = 33/376 (8%)

Query: 34  NFPVWTVLIGTLFARTSFFMAWPFLVVFLYQDYHATATEVGAMLATSALVGSLTGLYSGY 93
           N   + +LI  +     FF+ +P + +         A  VG  L     +    G++ G 
Sbjct: 9   NLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWAAVMVGIALGLRQFIQQGLGIFGGA 68

Query: 94  LSDKFGRKWVMVSGTLIATFAYTGIGLSNQIWQFFIMIVLTGLMRPMIEAPGKAVIGDNL 153
           ++D+FG K ++V+G L+    +  +G++++ W  +   +L+GL   + + P  A++   +
Sbjct: 69  IADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLLWFSCLLSGLGGTLFDPPRSALVVKLI 128

Query: 154 -PDEKDRELALNVRYFLLNLGGAIGPLIGITLALAHPQVLFIVTGIAYFL----FGLWLL 208
            P ++ R  +L +     + G  IG L+G  L L +   L   TG   F+    F  WLL
Sbjct: 129 RPQQRGRFFSLLMMQD--SAGAVIGALLGSWL-LQYDFRLVCATGAVLFVLCAAFNAWLL 185

Query: 209 ATLERKGRFQQPDRSLLPNFSATLRVISKDNVFVK--MMLANFLMMFVYGQVESSLPQVI 266
               +    + P R  +         + +D  FV   + LA + M+ V  QV   LP  I
Sbjct: 186 PAW-KLSTVRTPVREGMTR-------VMRDKRFVTYVLTLAGYYMLAV--QVMLMLP--I 233

Query: 267 VRSGIADAAQLVAGLVLVNTMTIILFQFPTLKLLES-VPLFTRTRLGMALMGLAQVGFMF 325
           + + +A A   V  +  +     +   +P  +  E    L  R   G+ +M L+ +    
Sbjct: 234 MVNDVAGAPSAVKWMYAIEACLSLTLLYPIARWSEKHFRLEHRLMAGLLIMSLSMMPVGM 293

Query: 326 TPEAFPLGWYLACFVLSMGEVIAFPTLNVQIDRLAPAHLRGSYFGAAALYSLGFAIAPLA 385
                 L   +  F +  G +IA P        LA A  RGSY        +GF+   LA
Sbjct: 294 VSGLQQLFTLICLFYI--GSIIAEPARETLSASLADARARGSY--------MGFSRLGLA 343

Query: 386 GGMMIEYLNAQWLYGL 401
            G  I Y+   WL+ L
Sbjct: 344 IGGAIGYIGGGWLFDL 359