Pairwise Alignments

Query, 434 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., efflux MFS transporter YdeE from Escherichia coli ECRC62

 Score =  112 bits (280), Expect = 2e-29
 Identities = 88/370 (23%), Positives = 162/370 (43%), Gaps = 7/370 (1%)

Query: 56  PFLVVFLYQDYHATATEVGAMLATSALVGSLTGLYSGYLSDKFGRKWVMVSGTLIATFAY 115
           PF+ ++L + Y  +   +G  +  +  +G +  L  G L+DKF +K  M+         +
Sbjct: 28  PFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGF 87

Query: 116 TGIGLSNQIWQFFIMIVLTGLMRPMIEAPGKAVIGDNLPDEKDRELALNVRYFLLNLGGA 175
             I L N +    +   L      +     KA   DNL      ++  ++ Y +LN+G  
Sbjct: 88  IAIPLVNNVTLVVLFFALINCAYSVFATVLKAWFADNLSSTSKTKI-FSINYTMLNIGWT 146

Query: 176 IGPLIGITLALAHPQVLFIVTGIAYFLFGLWLLATLERKGRFQQPDRSLLPNFSATLRVI 235
           IGP +G  L +    + F +  I      L++   ++R  +    +   +     + +V+
Sbjct: 147 IGPPLGTLLVMQSINLPFWLAAICSAFPILFIQIWVKRSEKIIATETGSV----WSPKVL 202

Query: 236 SKDNVFVKMMLANFLMMFVYGQVESSLPQVIVRSGIADAAQLVAGLVL-VNTMTIILFQF 294
            +D   +    + FL  FV G   S + Q ++     D A+ V  +VL VN   ++  Q+
Sbjct: 203 LQDKALLWFTCSGFLASFVSGAFASCISQYVMVIADGDFAEKVVAVVLPVNAAMVVTLQY 262

Query: 295 PTLKLLESVPLFTRTRLGMALMGLAQVGFMFTPEAFPLGWYLACFVLSMGEVIAFPTLNV 354
              + L    +      G     +  VGF+F+  +  L W ++  V ++GE+I  P   +
Sbjct: 263 SVGRRLNPANIRALMTAGTLCFVIGLVGFIFSGNSLLL-WGMSAAVFTVGEIIYAPGEYM 321

Query: 355 QIDRLAPAHLRGSYFGAAALYSLGFAIAPLAGGMMIEYLNAQWLYGLCFVLCLAMMGLYY 414
            ID +AP  ++ SYF A +L  LG AI PL  G+++  L    L+ +  ++ +A   L  
Sbjct: 322 LIDHIAPPGMKASYFSAQSLGWLGAAINPLVSGVVLTSLPPSSLFVILALVIIAAWVLML 381

Query: 415 LAQREQEMGE 424
              R +  G+
Sbjct: 382 KGIRARPWGQ 391