Pairwise Alignments

Query, 434 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., multidrug efflux MFS transporter from Dickeya dianthicola ME23

 Score = 60.8 bits (146), Expect = 7e-14
 Identities = 86/387 (22%), Positives = 158/387 (40%), Gaps = 29/387 (7%)

Query: 35  FPVWTVLIGTLFARTSFFMAWPFLVVFL----YQDYHATATEVGAMLATSALVGSLTGLY 90
           F  W   +G  F   +     PFL +++      D+ A     G + ++S LV ++    
Sbjct: 9   FSAW---LGCFFTGMAMSQILPFLPLYIEHLGVSDHTALNLWSGLVFSSSFLVSAIVAPL 65

Query: 91  SGYLSDKFGRKWVMVSGTLIATFAYTGIGLSNQIWQFFIMIVLTGLMRPMIEAPGKAVIG 150
            G L+D+ GRK +++   L  +      G++  +WQ FI+  L GL    I     A+I 
Sbjct: 66  WGSLADRKGRKLMLLRAALGMSLVMALQGMATNVWQLFILRTLMGLTSGYI-PNAMALIA 124

Query: 151 DNLPDEKDRELALNVRYFLLNLGGAIGPLIGITLA--LAHPQVLFIVTGIAYFLFGLWLL 208
             +P  +    AL         G  IGPL+G  +A  +    V FI + + +  F + L 
Sbjct: 125 SQVPRSRS-GWALGTLSTGQVAGVLIGPLLGGFMADTIGLRMVFFITSAMLFICFLITLF 183

Query: 209 ATLER----KGRFQQPDRSLLPNFSATLRVISKDNVFVKMMLANFLMMFVYGQVESSLPQ 264
           A  E       + Q   R++  +    L +IS     + + +AN       G +   L  
Sbjct: 184 AIRENAVTISKKAQLSGRAVFASLPYPLLIISLCFTTMMIQMAN-------GSISPILTL 236

Query: 265 VI--VRSGIADAAQLVAGLVLVNTMTIILFQFPTLKLLESVPLFTRTRLGMALMGLAQVG 322
            I  +   I + A +   +  V  M+ +L      +L +S+   ++  L +AL   A + 
Sbjct: 237 FIRDLSPNIDNIAFISGVIAAVPGMSALLSASHLGRLGDSIG--SQRVLIVALFLCALLL 294

Query: 323 FMFTPEAFPLGWYLACFVLSMGEVIAFPTLNVQIDRLAPAHLRGSYFG--AAALYSLGFA 380
           F+ +     +   +  F L   +    P +   + + +   + G  FG   + +Y LG  
Sbjct: 295 FLMSAVQSSVQLGILRFALGFADGALMPAVQALLVKYSSQQVTGRIFGYNQSCMY-LGNV 353

Query: 381 IAPLAGGMMIEYLNAQWLYGLCFVLCL 407
           + PL G  +   L  +W++ +  +L L
Sbjct: 354 VGPLIGSTVSASLGYRWVFLVTALLVL 380



 Score = 24.6 bits (52), Expect = 0.006
 Identities = 42/194 (21%), Positives = 71/194 (36%), Gaps = 17/194 (8%)

Query: 246 LANFLMMFVYGQVESSLPQVIVRSGIAD--AAQLVAGLVLVNTMTIILFQFPTLKLLESV 303
           L  F       Q+   LP  I   G++D  A  L +GLV  ++  +     P    L   
Sbjct: 13  LGCFFTGMAMSQILPFLPLYIEHLGVSDHTALNLWSGLVFSSSFLVSAIVAPLWGSLADR 72

Query: 304 P----LFTRTRLGMALMGLAQVGFMFTPEAFPLGWYLACFVLSMGEVIAF-PTLNVQIDR 358
                +  R  LGM+L+ +A  G           W L      MG    + P     I  
Sbjct: 73  KGRKLMLLRAALGMSLV-MALQGMATNV------WQLFILRTLMGLTSGYIPNAMALIAS 125

Query: 359 LAPAHLRGSYFGAAALYSL-GFAIAPLAGGMMIEYLNAQWLYGL--CFVLCLAMMGLYYL 415
             P    G   G  +   + G  I PL GG M + +  + ++ +    +    ++ L+ +
Sbjct: 126 QVPRSRSGWALGTLSTGQVAGVLIGPLLGGFMADTIGLRMVFFITSAMLFICFLITLFAI 185

Query: 416 AQREQEMGEKERLS 429
            +    + +K +LS
Sbjct: 186 RENAVTISKKAQLS 199