Pairwise Alignments

Query, 434 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., Arabinose efflux permease from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 50.1 bits (118), Expect = 2e-10
 Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 18/231 (7%)

Query: 42  IGTLFARTSFFMAWPFLVVFLYQDYHATATEVGAMLATSALVGSLTGLYSGYLSDKFGR- 100
           +GT   RT+  ++W      +Y   H+T   +G     S     L  LY G LSDK+ R 
Sbjct: 28  VGTWMERTA--VSW-----VVYDMTHSTFM-LGLTAFVSQFPSFLFSLYGGILSDKYPRL 79

Query: 101 KWVMVSGTLIATFAYTGI------GLSNQIWQFFIMIVLTGLMRPMIEAPGKAVIGDNLP 154
           K VM+  T +A+F    I      G    IW    +I L G++        ++++ + L 
Sbjct: 80  KIVMI--TQVASFVQAAILAIIVLGGDTAIWHILSLITLLGIINAFDIPARQSLVNELLT 137

Query: 155 DEKDRELALNVRYFLLNLGGAIGPLI-GITLALAHPQVLFIVTGIAYFLFGLWLLATLER 213
           D  D   A+ +   ++NL   IGP I G+ L+     + F +  ++Y    + L     +
Sbjct: 138 DPADLSNAVALNSSVVNLARLIGPAIAGLVLSSFGAGICFSLNALSYLAVIVSLFFLRLK 197

Query: 214 KGRFQQPDRSLLPNFSATLRVISKDNVFVKMMLANFLMMFVYGQVESSLPQ 264
               +   +S L     TL  +   +V    ML   ++  +     + LP+
Sbjct: 198 PQPKKAKKQSNLSEIRDTLHYLKHHSVLAPTMLYIAIISLLVIPYNTLLPE 248