Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  117 bits (293), Expect = 2e-30
 Identities = 65/179 (36%), Positives = 100/179 (55%), Gaps = 8/179 (4%)

Query: 188 LYQEGIEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYG 247
           L Q  ++  A+ DPLTGL NR  FE+     L   Q +    A++FLD+D FK INDS G
Sbjct: 798 LAQARLDYQAHHDPLTGLPNRTLFESRLQAALNGHQETGQQGAVLFLDLDRFKHINDSLG 857

Query: 248 HDVGDQVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNR 307
           H +GD +LK  A RL+  +R+ D        ++AR  GDEF++LL G+++  D   + N+
Sbjct: 858 HPIGDLLLKDIAVRLKEQLRDID--------TVARLGGDEFIILLPGLQHASDAQYLANK 909

Query: 308 ICNLFVDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYY 366
           +   F   +   +    ++ SIG ++YP+D   +  L + AD AMY +K  G+N+   Y
Sbjct: 910 LLACFTPPFQAGEHEFFISASIGTSLYPEDGTDVATLVKNADAAMYRSKAKGRNRVESY 968