Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 758 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Sphingobium sp. HT1-2

 Score =  108 bits (270), Expect = 5e-28
 Identities = 70/172 (40%), Positives = 98/172 (56%), Gaps = 12/172 (6%)

Query: 193 IEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHDVGD 252
           +  LA  D LTGLANR  F     +  +  + S    A+V +D+D FKRINDS GHD GD
Sbjct: 322 LAHLAMTDALTGLANRSHFMASLMQAAQSTERSGGQMAVVLIDVDEFKRINDSAGHDAGD 381

Query: 253 QVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNR-ICNL 311
            +L   A RLR+++R  D         IAR  GDEF ++L  +R L DLD IL+R I  L
Sbjct: 382 ALLCAVAERLRDSVRPAD--------MIARMGGDEFAVILTRLRGLADLDTILSRMIARL 433

Query: 312 FVD-RYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQ 362
            +  R+   D+  +  VS+G A+YP  A  + +L + AD A+Y AK+ G+ +
Sbjct: 434 HMPLRHGGRDI--DCRVSMGVALYPDHAGDMIDLMKHADIALYEAKNSGRGR 483