Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 754 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  114 bits (286), Expect = 7e-30
 Identities = 99/352 (28%), Positives = 159/352 (45%), Gaps = 42/352 (11%)

Query: 30  LISSGVATAIFLGFALYYYFNHQPLSSGLLLLSGIVTLLNMIS-LNRHRELHTQADLILS 88
           LI  G+    F+G A       Q   +GLLL S  + LL  ++ L   R L   +  +  
Sbjct: 132 LIGLGIILMHFVGMAAMETGARQYYQTGLLLASAAIALLTALTALYLARYLRNGSGTLYQ 191

Query: 89  LIL----LTYALALVSNAQHELSHLLWLYPLITTLVMI---NPFRLGLVYSAAICL---- 137
            +     L  A  +V+     +S +  + P  T L +    N  +LGL       L    
Sbjct: 192 AMKYGASLLMAGGIVATHFTAMSAMTLVIPADTALRLPSGDNSLQLGLGIGFITLLISGA 251

Query: 138 AMTASILFNPAQTGSYPIAQTYFLVSLFTLTIICNTASFFFSKAINYIHTLYQEGIEELA 197
           +++A++     Q+  + + +   L+S                          +  +++ A
Sbjct: 252 SISAALADKKLQSKEHDLRRVSVLLSQLDQA---------------------RASLQQAA 290

Query: 198 YLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHDVGDQVLKH 257
           + D LT L NR  F     E+L E Q+S    A++FLDID+FKRINDS GHD GD++LK 
Sbjct: 291 HYDALTNLLNRRGFNQVFAERLVEHQASENRLAVMFLDIDHFKRINDSLGHDAGDELLKV 350

Query: 258 FAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRICNLFVDRYP 317
            A+ ++        AT  HD  +ARF GDEF ++   + +  +  ++  RI     D   
Sbjct: 351 IANHIK-------AATRNHDL-VARFGGDEFCVVT-SLNSRDEARHLAQRIMQRMKDPID 401

Query: 318 ETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYYHDA 369
                  +T SIG +I+P D  T  EL + AD A+Y +K  G+N   +++D+
Sbjct: 402 LGGRRMVMTTSIGISIFPDDGSTAEELLKHADLALYQSKDNGRNSLNFFNDS 453