Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  107 bits (266), Expect = 9e-28
 Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 8/180 (4%)

Query: 190 QEGIEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHD 249
           +E I+ LA+ D LTGL NR       +  L   +      A++++D+D FK IND+ GH+
Sbjct: 273 EERIKRLAHHDTLTGLPNRNLLNDRISHALARVRRHGGRMAVLYVDLDKFKPINDTLGHE 332

Query: 250 VGDQVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRIC 309
            GD VLK  A RL N +R+ D        +++R  GDEFV+++  +    +   +  +I 
Sbjct: 333 AGDAVLKEVARRLDNCVRSSD--------TVSRVGGDEFVVVVEEIGRPGEAAMVARKII 384

Query: 310 NLFVDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYYHDA 369
                  P  D    +  SIG A++P D  T+ E+++ AD AMY  K+ G+N Y +Y D+
Sbjct: 385 EALGTPVPYEDHSCLVGASIGIAVFPDDGNTMEEVSKAADVAMYRVKNSGRNGYCFYSDS 444