Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 627 a.a., Bacteriophytochrome cph2 from Alteromonas macleodii MIT1002

 Score =  115 bits (287), Expect = 5e-30
 Identities = 93/366 (25%), Positives = 174/366 (47%), Gaps = 32/366 (8%)

Query: 16  EMTEMRFARKQHIVLISSGVATAIFLGFALYYYFNHQPLSSGL---LLLSGIVTLLNMIS 72
           ++ ++   R++ ++ IS+        GF L   F    ++ G+   + L G+ +L+   S
Sbjct: 12  KLADLTSLRRRRVIQISA------VTGFGL---FASSLVARGITFDIFLLGLFSLIVTGS 62

Query: 73  LNRHRELHTQADLIL-SLILLTYALALVSNAQHELSHLLWLYPLITTLVMINPFRLGLVY 131
           L     + T + L+L ++  + +AL+       +++ + +   +I   ++      G V 
Sbjct: 63  LAYKYYVTTSSYLLLGAMSSMLFALSATGAGVFDIAMIGYPGVIIFAALLGGIALFGTVL 122

Query: 132 SAAICLAMTAS-ILFNPAQTGSYPIAQTYFLVSLFTLTIICNTASFFFSKAINYI-HTLY 189
           S  +   +T + ++ +   T + PI     ++ +  + +I   + F   + I  +  +L 
Sbjct: 123 SLVLLQCITLTWLIMHDVVTPNPPILSWSHVLFIMVIYVITGFSVFILIQDIRRLMQSLQ 182

Query: 190 QE---------GIEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFK 240
           QE          I+ LA+ DPLT L NR   E    EKL+E +      AL+F+D+DNFK
Sbjct: 183 QEVSKVEQNRAHIQHLAHHDPLTNLPNRILGERLFNEKLRESEEKGLQLALLFIDLDNFK 242

Query: 241 RINDSYGHDVGDQVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRD 300
            +ND+ GH  GD+ L+  +  + +++  K         S+ RF GDEF++L   + +  +
Sbjct: 243 PVNDALGHAAGDRFLQKISQTITDHLSTKQ--------SLIRFGGDEFIVLAPEISDKSE 294

Query: 301 LDNILNRICNLFVDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGK 360
           +D++   +     + +        ++ SIG A  P D I   +L R AD AMY AK  G+
Sbjct: 295 IDDLCKNLITWCSNEFEVLQTKVVVSGSIGVAQAPYDGIKFKQLCRKADIAMYEAKRNGR 354

Query: 361 NQYRYY 366
           N+Y YY
Sbjct: 355 NRYEYY 360