Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 777 a.a., Cyclic di-GMP phosphodiesterase Gmr from Alteromonas macleodii MIT1002

 Score =  113 bits (282), Expect = 2e-29
 Identities = 63/173 (36%), Positives = 97/173 (56%), Gaps = 9/173 (5%)

Query: 197 AYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHDVGDQVLK 256
           A  D LTGL NR          +K     +   A++FLD+DNFK IND+ GHD+GD++L 
Sbjct: 351 ANFDSLTGLPNRNLMLDHLQLAIKAADRESDKVAVIFLDLDNFKDINDTLGHDIGDKLLI 410

Query: 257 HFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRICNLFVDRY 316
             A R++  +R+ D        +++R  GDEFV++L G++ L  ++ ++ ++    V  Y
Sbjct: 411 ECARRIKQCLRSDD--------TVSRLGGDEFVIILNGIKGLSSIELVVQKLLGEIVKPY 462

Query: 317 PETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYY-HD 368
                  + + S+G  +YP DA  +  L + AD+AMY AK  GKN Y+YY HD
Sbjct: 463 SLELERVHTSASLGVTLYPDDAKDVKGLLKNADQAMYGAKDLGKNNYQYYTHD 515