Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  106 bits (264), Expect = 7e-28
 Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 13/290 (4%)

Query: 2   RKLAPLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVVL 61
           + L PL +L +F AVA   S   AA  L+V+ SA+S  ++ LE  LG+PLF R  R + L
Sbjct: 5   KDLPPLLALRAFEAVARHLSFIKAASELSVTQSALSHQVQKLEQHLGKPLFIRRTRAIDL 64

Query: 62  NSAGKRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAPD 121
            + G++YY ++ PAL+ I  AT +      +  + + ++ S A  W  PR + F    P 
Sbjct: 65  TADGQQYYDEIRPALDAIAAATRTQRVAPRATVLRIGLLASFATLWLAPRLAGFLTRYPH 124

Query: 122 VDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMPLK 181
           + V +       ++    VD+A+ +G+  +W D    +L  + +  V S        P  
Sbjct: 125 IQVELLPSIQLANVAAAEVDLAIRYGK-GDWPDVQATRLMQEVISPVCS--------PTF 175

Query: 182 QALAQFPAIFVNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLGVFVTH 241
           +A+   P +   +  R  +W  W    QV      R +    +   ++A ++G G+ +  
Sbjct: 176 KAMQDSPLLMATS-HRPFEWTDWSAHYQVDLAHHPRVMLHDYNI-VVEAAVAGQGIAMGR 233

Query: 242 KLFIKQELESGILKE-IGQPVTHPDQGYYFACRPEALRSEAVLTLRSWLR 290
              I++ L+ G L E    P  H D GY+    P+   +EA      WL+
Sbjct: 234 HRLIERRLQDGSLVEAFDWPPYHSDIGYWLIA-PQGSTNEAAACFSRWLK 282