Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  111 bits (278), Expect = 2e-29
 Identities = 80/295 (27%), Positives = 126/295 (42%), Gaps = 4/295 (1%)

Query: 2   RKLAPLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVVL 61
           RK+    +L SF A A   S T AA  L+++  AI + I SLE  L   LF R  R V L
Sbjct: 3   RKIPSTTALVSFEAAARHESFTKAAHELSITQGAICRQIASLEEFLSVELFRRSRRGVKL 62

Query: 62  NSAGKRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAPD 121
             AG  Y ++VA  L+ +   T S++    +N I L ++ +    W IPR   FQ   P+
Sbjct: 63  TEAGLSYSRRVATQLDAVERDTLSVMGQQGANTIELAVVPTFGTQWLIPRLKDFQRKHPE 122

Query: 122 VDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMPLK 181
           V V ++  T  F   +   D A+  G   +W      +L  +  V V S  +++      
Sbjct: 123 VTVNLTNRTRPFLFADTEFDAAIYFGD-ADWSGTESHRLMGENPVPVCSPRLLANTTQFS 181

Query: 182 -QALAQFPAIFVNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLGVFVT 240
            Q +A+ P   +    R   W  W  A Q+  P       +   +   QA +  +G+ + 
Sbjct: 182 PQEIAELP--LLQQTTRPYAWRQWFNAQQLNIPRDMTGPRYELFSMLSQAAMHDMGIALI 239

Query: 241 HKLFIKQELESGILKEIGQPVTHPDQGYYFACRPEALRSEAVLTLRSWLRNEFQK 295
               I++ELE G L           + YY       + S ++   R WL ++ Q+
Sbjct: 240 PPFLIQRELEEGQLVIASPEALSSSKAYYLMIPDRKVESASLHAFRDWLIDQSQR 294