Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  114 bits (284), Expect = 4e-30
 Identities = 84/293 (28%), Positives = 138/293 (47%), Gaps = 4/293 (1%)

Query: 2   RKLAPLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVVL 61
           R    ++ L +F AVA   S+TLAA AL ++ SA+S+ I  LE  LG+ L  + GR V L
Sbjct: 3   RDCPTIQELLAFDAVARHQSITLAAGALCITVSAVSKQIAGLEAFLGRELLQKNGRGVQL 62

Query: 62  NSAGKRYYQKVAPALEQIVEAT-ESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAP 120
              G+ Y+QK++  L  I  AT E+      +  +TL  + +    W IPR  +F   + 
Sbjct: 63  TPQGRVYWQKISGGLRAIETATFEARSGDAGAGLLTLASVPTFLTKWLIPRLPAFSQKSR 122

Query: 121 DVDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMPL 180
            V +  S           GVD A+ +G    W     E +A  E V++++++++     +
Sbjct: 123 HVMLSFSRHLEPSDGIPAGVDAAIRYGP-DGWPGVVSEYIAGREFVLIVARSLVEGRHRI 181

Query: 181 KQALAQFPAIFVNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLGVFVT 240
            Q         +++      W  W   + V          F+  +  +QA L+GLG+ + 
Sbjct: 182 AQPADITGHTLLHHEGASGAWRQWAAQHGVPEVQTVAGPRFAQYSALIQAALNGLGIGLV 241

Query: 241 HKLFIKQEL-ESGILKEIGQPVTHPDQGYYFACRPEALRSEAVLTLRSWLRNE 292
            +L +++EL E  +L   G PV+  +QG+Y   RP+ L   A +  R WL  E
Sbjct: 242 PRLLVQEELAEGALLSPCGTPVS-VNQGHYLCYRPDRLDLPAFVAFREWLLEE 293