Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  114 bits (285), Expect = 3e-30
 Identities = 80/271 (29%), Positives = 128/271 (47%), Gaps = 1/271 (0%)

Query: 6   PLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVVLNSAG 65
           PL ++ +F A A   S T AA  L+V+HSA+S+ IKSLE  LG  LF R  RQV L + G
Sbjct: 14  PLNAVRAFAAAARHLSFTRAALELHVTHSAVSRQIKSLEEFLGVELFERRIRQVALTAEG 73

Query: 66  KRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAPDVDVR 125
           ++++ +V PAL QI  A  +L     +  + +N+  S A+ W IPR  SF    PD++ +
Sbjct: 74  QQFFAEVEPALAQIGAAARALQAQGTARAVRINVRPSFAVRWLIPRLPSFVEQYPDIEPQ 133

Query: 126 ISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMPLKQALA 185
           + T T          D+A+  G+              DE+++V + ++   + PL    +
Sbjct: 134 VVTSTVMPEQAVDSFDIAVRRGREGWPPSIKVRPFLKDEVLVVGAPSLFKTH-PLPDLRS 192

Query: 186 QFPAIFVNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLGVFVTHKLFI 245
               + ++   R+ DWD W +            L F      LQA + GLG+ +     +
Sbjct: 193 LAAHVLLSAKTRKDDWDAWKKQFGAPRARPAGRLQFDHLHFVLQAAVDGLGIALAPTSLV 252

Query: 246 KQELESGILKEIGQPVTHPDQGYYFACRPEA 276
             +L SG L+     +      YY+   P+A
Sbjct: 253 SHDLASGRLQSPLPALRMTLDRYYYGLSPDA 283



 Score = 23.9 bits (50), Expect = 0.005
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 213 PPQQRNLSFSASAQALQATLSGLGVFVTHKLFIKQ 247
           PP     +F+A+A+ L  T + L + VTH    +Q
Sbjct: 13  PPLNAVRAFAAAARHLSFTRAALELHVTHSAVSRQ 47