Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  102 bits (253), Expect = 2e-26
 Identities = 86/304 (28%), Positives = 137/304 (45%), Gaps = 19/304 (6%)

Query: 2   RKLAPLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVVL 61
           R+L PL SL +F A A   S   AA  L+V+ SAIS  +++LE  LGQPLF R+ RQ+ L
Sbjct: 12  RRLPPLLSLRAFEAAAAHLSFQRAALELSVTPSAISHQVRALEDTLGQPLFRRLTRQLAL 71

Query: 62  NSAGKRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAPD 121
             AG+R +  +    + +    + L +P  S ++TL    + A  W +PR ++F+   P 
Sbjct: 72  TPAGQRLFDDLRMGFDVLEAGIDKLRRPAASQQVTLTTNTAFAARWVLPRMAAFRKACPG 131

Query: 122 VDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNM---ISANM 178
           +++R+        L     D+A+  G    W      +L  +    + S  +     A++
Sbjct: 132 IELRLHASDTLVDLARGDADIAVRSGS-GNWPGLTAHELMPERYAPMCSPMLRLERVADL 190

Query: 179 PLKQAL-------AQFPAIFVNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQAT 231
           P +Q +       A  PA++   PR   +  +  +  + T  P    LSFS    A+ A 
Sbjct: 191 PKQQLIHCSWQPHALAPALW---PRWFKEAGVAPRHGRSTKAPS--GLSFSDETHAMLAA 245

Query: 232 LSGLGVFVTHKLFIKQELESGILKEIGQPVTHPDQGYYFACRPEALRSE-AVLTLRSWLR 290
           L G GV +       +EL +G L     P    D G YF         E AV  +  W+ 
Sbjct: 246 LGGHGVALLSLTLSAEELRNGALVRPFGPAL--DTGSYFLATANGREHEPAVRAVWEWIV 303

Query: 291 NEFQ 294
           ++ Q
Sbjct: 304 SQAQ 307