Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 87/297 (29%), Positives = 134/297 (45%), Gaps = 14/297 (4%)

Query: 1   MRKLAP-LKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQV 59
           MRK  P L +L +F A A  GS T AA  L ++ SA+ + +  LE +LG PLF RV R++
Sbjct: 1   MRKDIPNLGALQAFEASARLGSFTRAAAELALTQSAVGRQVAMLEQRLGVPLFSRVRRRL 60

Query: 60  VLNSAGKRYYQKVAPALEQIVEATESLLKPMHSNRI-TLNMINSLALHWWIPRFSSFQAF 118
            L   G+ Y  ++   L+QI   T  +        +  L ++ + A  W IPR   F   
Sbjct: 61  TLTDVGREYAARIRRHLDQIRRDTLEISAGHEMGFVLELAVVPTFATQWLIPRLPEFSEL 120

Query: 119 APDVDVRISTLTGAFSLEEQGVDVALIHGQ--WREWQDYYCEQLADDELVMVISQNMISA 176
            P++ V +S  +  FS +E   D A+  G   W   +       A+ E+V + S     A
Sbjct: 121 HPNITVNLSARSQPFSFQENAYDAAIYFGDQFWPNTRGGLI--FAEGEMVPICSPAFRDA 178

Query: 177 NMPLKQALAQFPAIFVNNPRRQTDWDIW-CQANQVTPPPQQRNLSFSASAQALQATLSGL 235
           N P  +A  +     V+   R   W  W  Q          R   +      + AT +G+
Sbjct: 179 NGPWDEAGFE-RCRHVHLSTRAHAWRDWYAQQGWEYTVHASRGPRYELFTMVVAATAAGM 237

Query: 236 GVFVTHKLFIKQELESGILKEIGQPV-THPD--QGYYFACRPEALRSEAVLTLRSWL 289
           GV +  ++ ++ EL++G   E+  PV  H D  QGYYFA       S A+   + W+
Sbjct: 238 GVGLAPRILVEHELKTG---ELVIPVDRHLDVRQGYYFAYPEGRPASGALEHFKRWV 291