Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., Glycine cleavage system transcriptional activator from Pseudomonas lactucae CFBP13502

 Score =  105 bits (261), Expect = 2e-27
 Identities = 86/296 (29%), Positives = 134/296 (45%), Gaps = 5/296 (1%)

Query: 2   RKLAPLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVVL 61
           + L PL SL  F A A  GS + A D L+++ +AIS+ I+ LE  LG  LF+R  R V L
Sbjct: 6   KTLPPLASLLPFEAAARLGSFSKAGDELHITQAAISRQIRGLEDNLGVKLFYRRNRAVFL 65

Query: 62  NSAGKRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAPD 121
              G    + V+ AL  I ++   L    HSNR+ L      A +W +PR SSF    P 
Sbjct: 66  TQEGHDLARVVSDALHSIRDSAARLRASPHSNRVVLLCQLCEAFYWLMPRLSSFHQQYPQ 125

Query: 122 VDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMPLK 181
           +++++ T T   +      DVAL     R    +     A DE+  V S   ++   PL 
Sbjct: 126 IEIQVVTSTRPLTEFTGPFDVAL-QSTRRASGAHPLMFTASDEVFPVCSPAYLATPKPLS 184

Query: 182 QALAQFPAIF--VNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLGVFV 239
            A  Q        + P    +W+ W Q          R+++F +    LQA + G GV +
Sbjct: 185 LADLQSCTFLHHSSEPPHLMEWESWLQVFGQALAEDARSVTFDSYPLMLQAAVEGHGVAM 244

Query: 240 THKLFIKQELESG-ILKEIGQPVTHPDQGYYFACRPEALRSEAVLTLRSWLRNEFQ 294
             +    + +ESG +++   + V  P+    +  +    R+E +  L  WL  +FQ
Sbjct: 245 GWQRTAGRLIESGALVRPCAERVYLPEAISIYRHQEAGSRAE-IAALLGWLEAQFQ 299