Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., Glycine cleavage system transcriptional activator from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  112 bits (280), Expect = 1e-29
 Identities = 83/291 (28%), Positives = 136/291 (46%), Gaps = 9/291 (3%)

Query: 1   MRKLAPLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVV 60
           +R+L PL S+ +F A     S + AAD L+V+H A+S  IK+LE  LG PLF R G+ V 
Sbjct: 3   LRRLPPLGSIRAFEAAGRLLSFSKAADELSVTHGAVSHQIKALEGWLGVPLFLRQGKSVA 62

Query: 61  LNSAGKRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAP 120
           L   G+ Y   ++PAL  I  A+  +        + +N + +  + W  PR + F+A  P
Sbjct: 63  LTDQGRLYLDSISPALAAIAAASRRI---STHEVLRVNALPTFTMRWLFPRLAQFRALYP 119

Query: 121 DVDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMPL 180
            ++V+IST     S     +DV +I  +  E    +  ++  +    V + +++   +PL
Sbjct: 120 HIEVQISTGLEPMSRLPANIDV-VIRREPHEVTGLHKVRVLSETAFPVCAPSLLE-RVPL 177

Query: 181 KQALAQFPAIFVNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLGVFVT 240
            +         ++ P R+T WD W      +     ++L        LQA + G+GV + 
Sbjct: 178 TRIADLAQHTILHCPARRTAWDDWLAIAHHSRVVPAQSLELEHLYFCLQAAIDGIGVAMG 237

Query: 241 HKLFIKQELESG-ILKEIGQPV-THPDQGYYFACRPEALRSEAVLTLRSWL 289
           +   +  +L SG ++   G  V T P  GY+   R E      V T   WL
Sbjct: 238 YSPLVAPDLASGQLVAPFGDKVLTTP--GYFVITRTERQHDPVVKTFCEWL 286