Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., transcriptional regulator GcvA from Pantoea agglomerans CFBP13505 P0401

 Score =  127 bits (319), Expect = 3e-34
 Identities = 87/298 (29%), Positives = 139/298 (46%), Gaps = 2/298 (0%)

Query: 2   RKLAPLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVVL 61
           ++L PL +L  F A A   S T AA+ L V+ +A+S  IKSLE  LG  LF R  R ++L
Sbjct: 3   KRLPPLNALRVFDAAARHLSFTKAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSLLL 62

Query: 62  NSAGKRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAPD 121
              G+ YY  +      I EAT  L        +T++++ S A+ W +PR SSF    P 
Sbjct: 63  TEEGQSYYLDIKEIFSAINEATRKLQARSAKGALTVSLLPSFAIQWLVPRLSSFNMAYPG 122

Query: 122 VDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMPLK 181
           +DVRI  +          VDVA+ +G+   W     E+L  + L+ V S ++++ + PLK
Sbjct: 123 IDVRIQAVDRDEEKLADDVDVAIFYGR-GNWPGLRVEKLYAEYLLPVCSPSLMTGDNPLK 181

Query: 182 QALAQFPAIFVNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLGVFVTH 241
             +       +++  R+ DW  + +   +     Q+   FS SA  LQA + G GV + +
Sbjct: 182 TPMDLSRFTLLHDASRR-DWQSYIRQLGLQHINVQQGPIFSHSAMVLQAAIHGQGVALAN 240

Query: 242 KLFIKQELESGILKEIGQPVTHPDQGYYFACRPEALRSEAVLTLRSWLRNEFQKNQNR 299
            +  + E+E+G L      V      +Y  C         +   R W+  +    Q +
Sbjct: 241 NVMAQSEIEAGRLICPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILEKAATEQEK 298