Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., transcriptional regulator GcvA from Magnetospirillum magneticum AMB-1

 Score =  114 bits (284), Expect = 4e-30
 Identities = 88/298 (29%), Positives = 144/298 (48%), Gaps = 15/298 (5%)

Query: 2   RKLAPLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVVL 61
           R+L PL++L++F A A   S   AA+ L V+ +AISQ IK LE  LG  LFHR G ++ L
Sbjct: 3   RRLPPLRALHAFEAAARHLSFARAAEELGVTPAAISQQIKQLEDILGVGLFHR-GTRLSL 61

Query: 62  NSAGKRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAPD 121
             A      +V+ A +++  A   L     +  + ++   + A  W +PR + FQ   P 
Sbjct: 62  TRAAALVSGEVSDAFDRLASAVGRLAPDGPARPLVVSAPPAFAARWLVPRLTRFQDAHPG 121

Query: 122 VDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMPLK 181
           +D+ +S       L+ +GVD+A+ +G  R +     E+L  +E+V V +   ++A +   
Sbjct: 122 IDLHLSATLRLVDLDREGVDLAIRYGPGR-YPGLLVERLRLEEVVAVATPR-LAAGLGEV 179

Query: 182 QALAQFPAIFVN-----NPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLG 236
             LA+   + VN     +P   T W  W      +P    R   F  ++  L+A L+GLG
Sbjct: 180 SDLAR-ATLLVNEGIGWDPSFPT-WPAWLSEMGASPAETLRLRPFGDASLVLEAALAGLG 237

Query: 237 VFVTHKLFIKQELESGILKEI--GQPVTHPDQGYYFACRPEALRSEAVLTLRSWLRNE 292
           V +  +  +  EL  G L  +  G+P+      Y+ AC PE      +   R W++ E
Sbjct: 238 VALVWRTLVCDELAGGRLVALFPGRPLA---SAYHLACLPERAEFPPIRAFRDWIKAE 292