Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., DNA-binding transcriptional dual regulator (NCBI) from Escherichia coli BW25113

 Score =  130 bits (327), Expect = 4e-35
 Identities = 86/288 (29%), Positives = 136/288 (47%), Gaps = 2/288 (0%)

Query: 2   RKLAPLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVVL 61
           ++L PL +L  F A A   S T AA+ L V+ +A+S  IKSLE  LG  LF R  R ++L
Sbjct: 3   KRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSLLL 62

Query: 62  NSAGKRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAPD 121
              G+ Y+  +     Q+ EAT  L        +T++++ S A+HW +PR SSF +  P 
Sbjct: 63  TEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIHWLVPRLSSFNSAYPG 122

Query: 122 VDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMPLK 181
           +DVRI  +          VDVA+ +G+   W     E+L  + L+ V S  +++   PLK
Sbjct: 123 IDVRIQAVDRQEDKLADDVDVAIFYGR-GNWPGLRVEKLYAEYLLPVCSPLLLTGEKPLK 181

Query: 182 QALAQFPAIFVNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLGVFVTH 241
                     +++  R+ DW  + +   +     Q+   FS SA  LQA + G GV + +
Sbjct: 182 TPEDLAKHTLLHDASRR-DWQTYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGVALAN 240

Query: 242 KLFIKQELESGILKEIGQPVTHPDQGYYFACRPEALRSEAVLTLRSWL 289
            +  + E+E+G L      V      +Y  C         +   R W+
Sbjct: 241 NVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWI 288