Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., transcriptional regulator GcvA from Erwinia tracheiphila SCR3

 Score =  123 bits (308), Expect = 6e-33
 Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 2/298 (0%)

Query: 2   RKLAPLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVVL 61
           ++L PL +L  F A A   S T AA+ L V+ +A+S  IKSLE  LG  LF R  R ++L
Sbjct: 3   KRLPPLNALRVFDAAARHLSFTKAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSLLL 62

Query: 62  NSAGKRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAPD 121
           +  G+ YY  +      + +AT  L        +T++++ S A+ W +PR SSF +  P 
Sbjct: 63  SEEGQSYYLDIKEIFSALNDATRKLQARSAKGALTVSLLPSFAIQWLVPRLSSFNSAYPG 122

Query: 122 VDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMPLK 181
           +DVRI  +    +     VDVA+ +G+   W     E+L  + L+ V S  +++ + P+K
Sbjct: 123 IDVRIQAVDRDEAKLSDDVDVAIFYGR-GNWPGLRVEKLYAEYLLPVCSPLLLTGDNPIK 181

Query: 182 QALAQFPAIFVNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLGVFVTH 241
                     +++  R+ +W  + +   V     Q    FS SA  LQA + G GV + +
Sbjct: 182 SPQDLASHTLLHDASRR-NWQSYTRQLGVAHINVQHGPIFSHSAMVLQAAIHGQGVALAN 240

Query: 242 KLFIKQELESGILKEIGQPVTHPDQGYYFACRPEALRSEAVLTLRSWLRNEFQKNQNR 299
            +  + E+E+G L      V      +Y  C         +   R W+  +    Q +
Sbjct: 241 NVMAQTEVEAGRLACPFNDVLVSKNAFYLVCHDSQAELGKIAAFRRWILAKAASEQEK 298