Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., Glycine cleavage system transcriptional activator from Azospirillum sp. SherDot2

 Score =  126 bits (316), Expect = 7e-34
 Identities = 90/294 (30%), Positives = 135/294 (45%), Gaps = 8/294 (2%)

Query: 2   RKLAPLKSLYS-FVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVV 60
           R+L P  S+ S F A A TGS T AA  L+++  A+S+ IK+LE Q+G  LF R G++V 
Sbjct: 5   RRLLPSMSMLSAFEAAARTGSFTAAAAELSLTQGAVSRQIKALEDQIGTALFIRKGQRVT 64

Query: 61  LNSAGKRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAP 120
           L   G  Y   +  AL QI  AT   +       + L ++ +    W +PR  +FQ   P
Sbjct: 65  LTPTGALYADPIRDALRQIAAATVRTIAAPKGGVLNLAILPTFGTRWLVPRLPAFQTAHP 124

Query: 121 DVDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMPL 180
            V +  +T    F      +D A IH  + +W D  C+ L D+E++ V S   + A+ P+
Sbjct: 125 QVTIHFTTKLAPFDFRLHDLDAA-IHYGFGDWPDAVCDHLLDEEVLPVCSPAFLKAH-PV 182

Query: 181 KQALAQFPAIFVNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLGVFVT 240
            +         ++   R   W+ W  A Q  PP     + F   A   QA  +GLGV + 
Sbjct: 183 TEPGDLLSLPLLHTSTRADAWNEWLSA-QGLPPRPGAGMVFEQFATTAQAAEAGLGVALL 241

Query: 241 HKLFIKQELESG-ILKEIGQPVTHPDQGYYFACRPEALRSE-AVLTLRSWLRNE 292
             L ++ EL+ G +L  I +P  H     Y+   P    +       R WL  E
Sbjct: 242 PTLLVRAELDDGTLLPAIDRP--HRSARAYYLVHPRGKANHPPFAAFRQWLLAE 293