Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Gcv operon activator from Alteromonas macleodii MIT1002

 Score =  119 bits (299), Expect = 7e-32
 Identities = 85/288 (29%), Positives = 129/288 (44%), Gaps = 2/288 (0%)

Query: 2   RKLAPLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVVL 61
           R+L PL +L SF A A   S T AAD L V+ +A+S  IK+LE  L   LF R  R ++L
Sbjct: 3   RRLPPLNALKSFEAAARHLSFTKAADELFVTQAAVSHQIKALEDFLSMKLFLRRNRTLLL 62

Query: 62  NSAGKRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAPD 121
              G+ Y+ ++    + + +ATE LL       IT+ M  S A  W +PR   F    PD
Sbjct: 63  TEEGQAYFLELKDIFKNLQDATERLLAKGSKGAITVAMPPSFASQWLVPRIHKFSLAHPD 122

Query: 122 VDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMPLK 181
           +DVRI  +       E  VDVA+ +G+ R W     +QL  + L  + S  +     PL 
Sbjct: 123 IDVRIKAVDFDEGFLEDDVDVAIYYGKGR-WAGLQADQLHREFLTPLCSPMLFQGPKPL- 180

Query: 182 QALAQFPAIFVNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLGVFVTH 241
            +L+      + +   +T W  W +   V      +   FS S   LQA   G G+ + +
Sbjct: 181 SSLSDLRHHVLLHDLSRTAWKNWLKHVGVVGVNVNQGPVFSHSMLVLQAAALGQGIALGN 240

Query: 242 KLFIKQELESGILKEIGQPVTHPDQGYYFACRPEALRSEAVLTLRSWL 289
            +  + E+E+G L    +        +Y  C         +   R W+
Sbjct: 241 TVLARPEIEAGRLVMPFEERVESRDAFYLVCEESQAELGKIAAFRDWI 288