Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  115 bits (287), Expect = 2e-30
 Identities = 86/290 (29%), Positives = 134/290 (46%), Gaps = 6/290 (2%)

Query: 2   RKLAPLKS-LYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVV 60
           RKL P  S L +F +VA  GS + AAD L ++  AIS+ + SLE QLG  LF R  R V 
Sbjct: 6   RKLLPSTSALAAFDSVARLGSFSAAADELALTQGAISRQVMSLEEQLGVRLFERGARGVS 65

Query: 61  LNSAGKRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAP 120
           L + G  Y + +A AL +I  A+  ++   H N + L M+ +    W +PR   F A  P
Sbjct: 66  LTTEGSAYAKSIAAALGEIRSASLQIMTKTHGNTLNLAMLPTFGTRWLLPRIPDFVANHP 125

Query: 121 DVDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMPL 180
           ++ +  +T  G F  E + +D+A+  GQ  +W       L  + +  V S   +SA+   
Sbjct: 126 EITINFATRIGQFDFEREQLDMAIHIGQ-ADWPGAESTFLMHEMVAPVCSPQFLSAHPVE 184

Query: 181 K-QALAQFPAIFVNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLGVFV 239
           K + +A  P + + +  R   W  W ++  ++    Q  + F   +   QA ++GLGV +
Sbjct: 185 KGEDIAALPLLHMAS--RPGAWGHWFESLGLSLALPQ-GMRFEQFSSVAQACIAGLGVAL 241

Query: 240 THKLFIKQELESGILKEIGQPVTHPDQGYYFACRPEALRSEAVLTLRSWL 289
                I  EL+S  L +           YY            V+  R WL
Sbjct: 242 MPLFLIDNELKSKQLVKAFDHQARSPSSYYAVAPLSRANHAPVVLFRDWL 291