Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  114 bits (286), Expect = 2e-30
 Identities = 88/299 (29%), Positives = 147/299 (49%), Gaps = 10/299 (3%)

Query: 2   RKLAP-LKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVV 60
           R+L P + +L +F   A  G+ T AA+ LN++ SA+S+ I  LE Q G  LF R+ R+VV
Sbjct: 5   RRLVPDIITLQAFECAARHGNFTRAAEELNLTQSAVSRQIGELEAQTGMQLFERIRRRVV 64

Query: 61  LNSAGKRYYQKVAPALEQIVEATESLLKPMHSN-RITLNMINSLALHWWIPRFSSFQAFA 119
           L+ AG+++   V   L+Q  +     +    S+  +++  + +    W +PR S F    
Sbjct: 65  LSEAGRKFLPDVRRLLQQSEQLMVRAVSAGTSHASLSVATLPTFGSRWLMPRLSRFIDAN 124

Query: 120 PDVDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMI-SANM 178
           PD+ + I + +  F  +E+G D+A+ +GQ   W    C  L ++ +V V S  ++  A +
Sbjct: 125 PDMTITIGSRSHPFDFDEEGFDLAIHYGQ-PIWAHGTCTFLCNEVIVPVASPALLRRAGV 183

Query: 179 PLKQALAQFPAIFVNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLGVF 238
              Q LA  P + V    R   W  W + N VT     +   F   +  ++A  SG+G  
Sbjct: 184 NRAQDLAGQPLLHVTT--RPKLWTEWLEMNGVTADNAYQGSRFDQFSMIIEAAASGIGFA 241

Query: 239 VTHKLFIKQELESGILKEIGQPVTHPDQGYYFACRPEALRSEAVL--TLRSWLRNEFQK 295
           +  +  I+ EL S  L+ +       D+ YY A  PE  R + VL    ++WL ++  K
Sbjct: 242 LLPRYLIEAELASSRLEIVFDIPLQTDKSYYVAL-PEG-RQDNVLARAFQAWLLDQVGK 298