Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

 Score =  118 bits (295), Expect = 2e-31
 Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 2/290 (0%)

Query: 3   KLAPLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVVLN 62
           +L  LK L +F A A   S+TLA++ LNV+  A+S  I+ LE +LG  LF R  R + L 
Sbjct: 4   ELPSLKGLQAFEAAARYRSVTLASNELNVTPGAVSLQIRELEARLGVQLFFRKPRSIQLT 63

Query: 63  SAGKRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAPDV 122
             G+RYY  +  A   + EAT  L        +TL+   + A+ W +PR  SFQ   P V
Sbjct: 64  REGERYYGALRTAFRMMREATAELTARSEITVLTLSCTPTFAVQWLMPRLPSFQQQHPHV 123

Query: 123 DVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMPLKQ 182
           DVRIS            VD+A+ HG  R ++     +  DD  + V +  ++    PL++
Sbjct: 124 DVRISVTNRLVDFSRDDVDLAVRHGFGR-YEGLESIRFIDDSTLPVCAPQLLEKYGPLRE 182

Query: 183 ALAQFPAIFVNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLGVFVTHK 242
           A     ++ + +   + +W  W +A   +         F  S  AL A  +G G+ +T +
Sbjct: 183 A-GDLKSVPLLHDENRNEWRRWLEAAGASEVDASGGTVFIDSNGALDAAKAGHGIALTRR 241

Query: 243 LFIKQELESGILKEIGQPVTHPDQGYYFACRPEALRSEAVLTLRSWLRNE 292
             + +EL  G L             Y+       L +  ++TL  W+ ++
Sbjct: 242 SLVSRELVEGALIAPFGTDMASTLAYFLVYPRRMLDNPDLVTLIDWMLSQ 291